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L2_031_000G1_scaffold_249_10

Organism: L2_031_000G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: 5527..6522

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=PEP {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; Plastid-encoded RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=101007 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria.;" source="Fragaria chiloensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 331.0
  • Bit_score: 667
  • Evalue 5.00e-189
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 326.0
  • Bit_score: 215
  • Evalue 1.40e-53
DNA-directed RNA polymerase subunit alpha n=5 Tax=Fragaria RepID=F1KLF4_FRAVE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 331.0
  • Bit_score: 667
  • Evalue 3.60e-189

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Taxonomy

Fragaria chiloensis → Fragaria → Rosales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 996
ATGGTTCGAGAGAAAGTAACAGTATCTACTCGGACACTACAGTGGAAATGTGTTGAATCAAGAGCAGACAGTAAGCGTCTTTATTATGGACGCTTTATTCTGGCCCCACTTATGAAAGGCCAAGCCGATACAATAGGCATCGCGATGCGAAGAGCTTTACTCGGAGAAATAGAAGGAACATGTATTACACGTGCAAAATCTGAGAAAATACCACACGAATATTCTACCTTTGTAGGTATTCAAGAATCTGTACATGAAATTTTAATGAATTTGAAAGAAATTGTATTGAGAAGTAATCTGTATGGAACTCGTAACGCGTCTATTTGTGTCAAGGGTCCTGGATATGTAACTGCTCAAGACATTATTTTACCACCCTCTATAGAAATCGTTGATAATACACAGCATATAGCTAACCTAACAGAACCAATTAATTTGTGTATTGAATTACAAATCGAGAGGAATCGTGGATATCGTATAAAAACGCCAAATAACTTTCAAGAAGGTAGTTATCCTATAGATGCTGTATTCATGCCCGTTCGAAATGCGAATCATAGTATTCATTCTTATGTGAATGGGAATGAAAAACAAGAGATACTTTTTATCGAAATATGGACAAATGGAAGTTTAACTCCTAAAGAAGCACTTCATGAAGCCTCTCGGAATTTGATTGATTTATTTATTCCCTTTTTACATGCAGAAGAAGAAAACTTACATTTCGAAAACAATCAACACAAAGTTACTTTACCCCTTTTTACTTTTCATGGTAAATTGGCTAATCCAAAGAAAATTAAAAAAGAAAACACATTGAAATATATTTTTATTGACCAATCAGAATTGCCCCCCAGGGTCTATAATTGCCTCAAAAGGTCCAACATACATACATTATTGGACCTTTTGAATAACAGTCAAGAAGATCTTATGAAAATTAAACATTTGCGCATAGAAGATGTAAAACATATATTGAATATTCTAGAAATAAAAAAGCATTTCGAATAA
PROTEIN sequence
Length: 332
MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTFVGIQESVHEILMNLKEIVLRSNLYGTRNASICVKGPGYVTAQDIILPPSIEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTPNNFQEGSYPIDAVFMPVRNANHSIHSYVNGNEKQEILFIEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENLHFENNQHKVTLPLFTFHGKLANPKKIKKENTLKYIFIDQSELPPRVYNCLKRSNIHTLLDLLNNSQEDLMKIKHLRIEDVKHILNILEIKKHFE*