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L2_037_000M1_scaffold_5436_1

Organism: dasL2_037_000M1_concoct_86_fa

near complete RP 49 / 55 BSCG 48 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 1..375

Top 3 Functional Annotations

Value Algorithm Source
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 124.0
  • Bit_score: 234
  • Evalue 7.00e-59
Predicted EndoIII-related endonuclease (EC:4.2.99.18) similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 116.0
  • Bit_score: 206
  • Evalue 4.10e-51
Endonuclease III n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMV4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 124.0
  • Bit_score: 234
  • Evalue 5.00e-59

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Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 375
GCCTGTATGCGGATGCTGCGCGACAGGTACGACTGCCGTGTGCCGGATGATTTCAACGCGCTGCTTGCCCTGCCCGGCGTGGGCCGCAAGAGTGCGAATCTGATCATGGGGGACGTATTCGGCAAGCCTGCCATCGTGACGGACACCCACTGCATCCGGCTGTGCAACCGCATCGGGCTGGTGGACAACGTCAAGGAGCCGGCCAAGGTCGAGCGGGAGCTGTGGAAGATCATCCCGCCTGCGGAGGGCAACGGCTTCTGCCACCGGCTGGTGGACCATGGCCGCGCCGTGTGCACAGCCCGCACCAAGCCCTACTGCGACAAATGCTGCCTGGCGGACGTATGCCGGGCACGAAAGGAATTTTTGCATGAATAA
PROTEIN sequence
Length: 125
ACMRMLRDRYDCRVPDDFNALLALPGVGRKSANLIMGDVFGKPAIVTDTHCIRLCNRIGLVDNVKEPAKVERELWKIIPPAEGNGFCHRLVDHGRAVCTARTKPYCDKCCLADVCRARKEFLHE*