ggKbase home page

L2_039_000M1_scaffold_13704_2

Organism: L2_039_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Location: comp(645..1181)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 178.0
  • Bit_score: 359
  • Evalue 1.60e-96
tRNA pseudouridine synthase A n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AZM0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 178.0
  • Bit_score: 359
  • Evalue 1.10e-96
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 174.0
  • Bit_score: 305
  • Evalue 7.10e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseburia intestinalis CAG:13 → Roseburia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 537
CCGGCAGATAAAATTGCATTTGCACTCAATCAGAGACTGCCGGAAGATATTGTGGTGCAGGGATCCTGTGAGGTGGAGGATGGCTGGCATCCGCGCTATCAGAACAGCAGAAAAACTTATGAATACCGTATTTTAAACCGGACATTCCGTATGCCGACAAGACGGCTGGATACCTATTTTTATCATTATCCACTGGATGTGGAGAAAATGAAAAAAGCGGCATCTTATCTTGAGGGAGAGCATGATGTTAAGAGTTTTTGTGCGATCGGTGCACAGGTAAAGACGACGGTGCGCACGATCTATGCCTGTGATGTGGAAAAAGAAGGAGATATCATCACGATCCGCGTGACGGGAAACGGTTTCCTTTACAATATGGTACGGATCATTGCAGGGACATTAGTGCAGGTTGGCGGTGGTGCGATCGAACCGGAGGCGGTAAAAGAAATTCTTGCAAAGAAAGACCGCAGCGCGGCAGGGCCTACGGCGCCGGCACACGGGCTTACGATGATGGGGATCGAGTTTGAAAACGTAGAATGA
PROTEIN sequence
Length: 179
PADKIAFALNQRLPEDIVVQGSCEVEDGWHPRYQNSRKTYEYRILNRTFRMPTRRLDTYFYHYPLDVEKMKKAASYLEGEHDVKSFCAIGAQVKTTVRTIYACDVEKEGDIITIRVTGNGFLYNMVRIIAGTLVQVGGGAIEPEAVKEILAKKDRSAAGPTAPAHGLTMMGIEFENVE*