ggKbase home page

L2_039_000M1_scaffold_4460_1

Organism: dasL2_039_000M1_metabat_metabat_20_fa_fa

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 5 ASCG 13 / 38
Location: 41..949

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 303.0
  • Bit_score: 428
  • Evalue 4.70e-117
tRNA pseudouridine synthase B (EC:4.2.1.70 5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 301.0
  • Bit_score: 366
  • Evalue 4.40e-99
tRNA pseudouridine synthase B n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1Z3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 303.0
  • Bit_score: 428
  • Evalue 3.30e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dorea longicatena CAG:42 → Dorea → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 909
ATGATACACGGAATCATCAATGTGTATAAAGAAAAGGGATATACTTCCCATGATGTGGTCGCAAAGCTTCGTGGAATATTAGGACAGAAGAAGATTGGACACACCGGAACTTTGGATCCAGATGCAGAAGGTGTTCTGCCGGTCTGCCTGGGAAAAGGGACCAGGCTTTGTGATCTTCTGACAGACAAGGATAAGGTCTATGAAACGGTGCTTCTTCTTGGGCAGACAACGGACACCCAGGATGTCAGCGGAGAAGTGCTGAACACCGGAAGTACACAGCATCTGACGAATAGTGAAGTGTGCAAGGCGGTGGAAAGTTTCGTGGGTCCGTATCTGCAGATACCACCTATGTATTCTGCCTTGAAGGTCAATGGGAAAAAGCTGTATGAGCTTGCCAGAGAAGGAAAGACGGTGGAGCGTAAAGCGCGCCCGGTAGAGATCAAAGGAATTCAGATTTTAGAAGTAGATCTTCCAAGAGTCCGTATGGAAGTGGAATGTTCTAAGGGAACTTATATCCGGACTTTGTGCCATGATATTGGCGAAAAGCTTGGGTGCGGAGGGTGTATGGAATCGCTGGTTCGCACCAGAGTGGAAAGGTTTTTGATAAAAGACAGCCTTCGGCTGGAAGAGATTGAACGCCTGAAGAAGGAAGATCAAATTTTGGAAGCGGTTATACCGGTGGATCAGATGTTCACGTCTTACAAGGCGGCAGTGGTAAAGAACCGATGGATGGCGCTTGCCAAAAATGGAAATGTCCTTCCGTATCAGGCGGTGACGGTGAAAGGAGAGCCTCTTGCCGATCAGGAGAAGATCCGTCTGTACGATGAAGAGGGGCAATTTATTGCGCTTTACAAATGGGAAGAAAAGCGAAGAGAATATCAGATTAAGAAGATGTTTTTTAATTCATAG
PROTEIN sequence
Length: 303
MIHGIINVYKEKGYTSHDVVAKLRGILGQKKIGHTGTLDPDAEGVLPVCLGKGTRLCDLLTDKDKVYETVLLLGQTTDTQDVSGEVLNTGSTQHLTNSEVCKAVESFVGPYLQIPPMYSALKVNGKKLYELAREGKTVERKARPVEIKGIQILEVDLPRVRMEVECSKGTYIRTLCHDIGEKLGCGGCMESLVRTRVERFLIKDSLRLEEIERLKKEDQILEAVIPVDQMFTSYKAAVVKNRWMALAKNGNVLPYQAVTVKGEPLADQEKIRLYDEEGQFIALYKWEEKRREYQIKKMFFNS*