ggKbase home page

L2_040_010G1_scaffold_106_8

Organism: L2_040_010G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 14
Location: comp(5576..6400)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:EFE60054.1}; EC=5.4.99.- {ECO:0000313|EMBL:EFE60054.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 274.0
  • Bit_score: 550
  • Evalue 9.70e-154
Pseudouridine synthase, RluA family n=3 Tax=Staphylococcus epidermidis RepID=F3TPR3_STAEP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 274.0
  • Bit_score: 553
  • Evalue 6.20e-155
Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YhcT type similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 274.0
  • Bit_score: 550
  • Evalue 2.00e-154

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 825
ATGAAATTTACAATACCTAAACAATTTAACGATTATACATTGAGAGAGATTTTCCAATATTTAAAATTACCTAAAAAAGACTTACATCAACTGAATATGTCTAAAGAAATTTTAATTAATAAAGAGTACGGTACATTATTAAATAATGTTAAAACTGGTGATCATGTTGAGATACCAACCCCTAATGAAGTAAGTTATTATTTACCAAGTTATCGATATGCTCAAATTTATTACGAGGATGATGACTTGGCCATTGTCATGAAACCAAAAGGTGTTAAAACGCATCCCAATGATTTAAAAGAGAGCAACACACTTATGAACCATGTGATTTACACTGTTGATAGTGAATATGTTGAGCCCATACATCGACTAGATCAAGAAACAGTAGGTTTATTGATAGTTGCTAAAAATCCGCTTATGAAAAAAATCTTAGACCGAATGTTAGAATATAATGAAATTACGCGTATATATAAAGCAAATGTCAAAGCGTTGTTACCTATTAAGCCACAAACGATAGATATGCCTATTGGTAAAGATAAATTTCATTCAAACAAACGAAGAATTTCCAACACAGGTCAACGTGCAATCACTCACATTATTAACTCTAAAATGATTAAAGAAGGTGTATGTCAACTCGACATTAAACTAGATACAGGTCGAACACACCAAATTCGTGTGCACCTTGCTGAGATTGGCCATCCAGTTATTGGGGATCCACTTTATGGAACTTCAACATTACGACAATTAGAGCTAAATAGTCATCAAATTGAATTTACTCATCCACTGACTCAAGAAATTATTTCTGTAAGTCTAGATGATAAATAG
PROTEIN sequence
Length: 275
MKFTIPKQFNDYTLREIFQYLKLPKKDLHQLNMSKEILINKEYGTLLNNVKTGDHVEIPTPNEVSYYLPSYRYAQIYYEDDDLAIVMKPKGVKTHPNDLKESNTLMNHVIYTVDSEYVEPIHRLDQETVGLLIVAKNPLMKKILDRMLEYNEITRIYKANVKALLPIKPQTIDMPIGKDKFHSNKRRISNTGQRAITHIINSKMIKEGVCQLDIKLDTGRTHQIRVHLAEIGHPVIGDPLYGTSTLRQLELNSHQIEFTHPLTQEIISVSLDDK*