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L2_040_071G1_scaffold_404_14

Organism: L2_040_071G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: comp(9944..10627)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUQ9_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 225.0
  • Bit_score: 431
  • Evalue 3.00e-118
Sigma factor {ECO:0000313|EMBL:EDT71837.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 227.0
  • Bit_score: 413
  • Evalue 1.20e-112
RNA polymerase sigma-F factor similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 224.0
  • Bit_score: 209
  • Evalue 5.20e-52

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 684
ATGACTAATGAGGAACTTGTTGTATTATATCAGCAAGGAGATAAAAAAGCTTTGGATAAGCTTTTAGAAAATAATGATAAGTTAATATATAAGGTAGCCAGTAAATTTTATTCAGAAAAGACAAGTTCTATTGAGTTTGATGATTTGCTTCAGGAGGGAAGAATAGGCTTTATATTAGCTTGTAGCAAATATGATATTGAATATATTAAGAGAACTAAGTTTATTACATATGCTTTTTACTGGATATATCAAAAGATTCATAGATTTATTACTAGATATAACACTAATGAGGAAATAAGTCTTAATACACCAGTAAGTGAAGAGGATAAAGATGAACTAATAAACAGTATAGAGAGTCATAGTAATGAGATAAATGATAGAGAAAAGGAATTATATTTAAGTGAGTTAAGGCTTGAATTAGAGGGCGTTATGGACAAGTATAATACTCTTAATGAAAGAGAAATATTAAAACTATATTATGGTTGGGATACTGATGAGTTGAGCATAGAACAAATAGCTGATATATTTGAAACCTCTTCTAATGAAGTGAAAAGTATAAAAGGAAAAGCTATAAGAAAATTAAGAAATAGTATGTGGTTTAAGATAGAGTATCAAAGAAGGTATAGAGAAGATATAACCTTTATGAGAGTATTAAGAAACTTAGACTATGGAATTACTATGTAG
PROTEIN sequence
Length: 228
MTNEELVVLYQQGDKKALDKLLENNDKLIYKVASKFYSEKTSSIEFDDLLQEGRIGFILACSKYDIEYIKRTKFITYAFYWIYQKIHRFITRYNTNEEISLNTPVSEEDKDELINSIESHSNEINDREKELYLSELRLELEGVMDKYNTLNEREILKLYYGWDTDELSIEQIADIFETSSNEVKSIKGKAIRKLRNSMWFKIEYQRRYREDITFMRVLRNLDYGITM*