ggKbase home page

L2_040_071G1_scaffold_105_2

Organism: L2_040_071G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: 1842..2327

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=3 Tax=Clostridium butyricum RepID=B1R2E2_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 161.0
  • Bit_score: 317
  • Evalue 5.80e-84
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 161.0
  • Bit_score: 317
  • Evalue 8.10e-84
sigV; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 160.0
  • Bit_score: 208
  • Evalue 8.20e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. IBUN125C → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 486
GTGCTTGCAATTTTAAAAAGAAAAAAAGTGGAAAAATATATAATAGAAAATAGAGAGTATTATTATAGATTAGCTTATTCTTATGTGAAAAATGAAGCTGATTCACTAGATGTTATACAAGAATCAATTATTAAAGCTCTAATTTCAATTGAAAGTTTGAAGGAAATAGAAAAAGTAAAATCATGGTTTTATAAGATAGTTATTAGAACAAGTATTGACTATATAAGAAAGAATAAAAAATATAATGATATGATAGATATTTCTGAAATTATAAATAATGGTAAGTCAGATCAATATAAGGACTTAGATTTATATAAAGCATTAGATGAATTAGATGAAACATATAAAACAATTATAATTTTAAGATACTTTGAAGATATGAAGATAAATGATATTGCCGATATATTAGATGAAAATCCAAATACAGTTAAGACAAGATTATATGCAGGGTTAAAAAAATTAAAAATAGATATAGGGGAGTGTTAG
PROTEIN sequence
Length: 162
VLAILKRKKVEKYIIENREYYYRLAYSYVKNEADSLDVIQESIIKALISIESLKEIEKVKSWFYKIVIRTSIDYIRKNKKYNDMIDISEIINNGKSDQYKDLDLYKALDELDETYKTIIILRYFEDMKINDIADILDENPNTVKTRLYAGLKKLKIDIGEC*