ggKbase home page

L2_040_071G1_scaffold_91_13

Organism: L2_040_071G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: comp(17064..17780)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 238.0
  • Bit_score: 470
  • Evalue 8.50e-130
ytzG1; RNA pseudouridine synthase YtzG (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 238.0
  • Bit_score: 427
  • Evalue 1.30e-117
Pseudouridine synthase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGR2_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 238.0
  • Bit_score: 471
  • Evalue 4.60e-130

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. IBUN13A → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 717
ATGGAAAGATTAGATAAGGTTATTTCAAATTTAGGATACGGAAGTAGAAAAGATGTTAAAGCATTTGTTAAAAAAGGATTAATTGAAGTTGATGGAGTTATTGTTAAAGATAACGGGCTTTCTATTGATCCAGAGAAATCTGTTATTAAGATTAATGGAGAAGAGGTTTTTTATAGAAAGTACATATATTTAATGATGAATAAGCCAGCAGGAGTTATATCTGCAACTCATGATAATAGAGATGAAACTGTTATAGATCTTTTATATGTAGATCATCAAGTTTTTGAACCATTTCCAGTGGGGAGATTAGATAAGGATACAGTAGGATTATTATTGCTTACTAATGATGGAGAACTTAATCATAGACTTATATCCCCTAAATGGCATGTTGATAAAGTGTATTATGCAAAAATTGACAAAAAAGTAGATGAAAAAGATATTCAAGCATTTAAAAGTGGTATTACATTAGATGATGGATATAAGTGTATGGAAGCTAAATTAGAAATAATATCTGCAAGTGAAGATGGATCGGAAATTAGAGTTACAATACAAGAAGGTAAATTTCATCAAGTCAAAAGAATGTTTGAGGCTGTTGGAAAGAAAGTTGTATATTTAAAAAGAGAGGAATTTGGGGGACTATCATTAGATGCTGATTTAGAAGAAGGCGAATATAGAGAATTATCAGATGAAGAATTAGCCCTATTAAAGAGTTATTAA
PROTEIN sequence
Length: 239
MERLDKVISNLGYGSRKDVKAFVKKGLIEVDGVIVKDNGLSIDPEKSVIKINGEEVFYRKYIYLMMNKPAGVISATHDNRDETVIDLLYVDHQVFEPFPVGRLDKDTVGLLLLTNDGELNHRLISPKWHVDKVYYAKIDKKVDEKDIQAFKSGITLDDGYKCMEAKLEIISASEDGSEIRVTIQEGKFHQVKRMFEAVGKKVVYLKREEFGGLSLDADLEEGEYRELSDEELALLKSY*