ggKbase home page

L2_040_089G1_scaffold_736_5

Organism: L2_040_089G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: comp(3977..4735)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=4 Tax=Clostridium butyricum RepID=B1QX29_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 252.0
  • Bit_score: 488
  • Evalue 3.90e-135
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 252.0
  • Bit_score: 488
  • Evalue 5.40e-135
sigF; RNA polymerase sigma-F factor SigF similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 252.0
  • Bit_score: 439
  • Evalue 3.40e-121

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. IBUN13A → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 759
ATGGATAAAGAGAATTTAAAACGAGAGGAATATAACTATGATCAAAATCCAGAACTATTATCACTAGCTAAAAAAGGTGATAATGATGCTATGAATAAGCTTATAGAAATAAATCTTCCCCTTGTAGCATCCATAAGCAAAAAATTTCTAAATAGAGGATATGATTATGAAGATATATTTCAAATTGGTTCTATAGGATTAGTTAAAGCTATAAATAATTTTGATTTAAATTATAATGTGAAATTTTCCACTTATGCAGTTCCAATGATAATGGGAGAAATCAAAAGATTTCTAAGAGATGATGGAATGATTAAAGTAAGTCGTAATGTGAAAAGTCTAGCAAGAAAAATTCACTATTATAGAGAGCAGTTAACAAATAAGCTTAAAAGATCTCCAACAATAGAAGAATTAGCAGAATATGCTGGTGTGGAAAAAGAGGAAATTGTCTTTGCAATTGAATCTGCAAACAGTCTTCAGTATCTTTATGATACTATACATCAAGATGACGGAGCTCCAGTTATGTTAATAGACAAACTTAGTGAAAAAAAAGGTGAAGATGATGTTAATTTAATTGAAAAAATAGCCCTTAAAGAGGCTTTGAGAAGTCTTGATGAAAAAGCAAGGCAGATAATAATGCTTAGATATTTCAAGGATAAAACGCAAATACAAGTTGCAAAAATGCTTGGAATAAGTCAGGTACAAGTATCAAGAATAGAAAAAAAAGTACTACTTCAAATGAAGAAAAAATTAGAAGAATGA
PROTEIN sequence
Length: 253
MDKENLKREEYNYDQNPELLSLAKKGDNDAMNKLIEINLPLVASISKKFLNRGYDYEDIFQIGSIGLVKAINNFDLNYNVKFSTYAVPMIMGEIKRFLRDDGMIKVSRNVKSLARKIHYYREQLTNKLKRSPTIEELAEYAGVEKEEIVFAIESANSLQYLYDTIHQDDGAPVMLIDKLSEKKGEDDVNLIEKIALKEALRSLDEKARQIIMLRYFKDKTQIQVAKMLGISQVQVSRIEKKVLLQMKKKLEE*