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L2_040_124G1_scaffold_10194_1

Organism: L2_040_124G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: comp(3..626)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D691AF related cluster n=1 Tax=unknown RepID=UPI0003D691AF similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 208.0
  • Bit_score: 411
  • Evalue 5.00e-112
LysM protein {ECO:0000313|EMBL:ETI81797.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 208.0
  • Bit_score: 411
  • Evalue 7.00e-112
cell wall metabolism, LysM type protein similarity KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 221.0
  • Bit_score: 139
  • Evalue 6.00e-31

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Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 624
GTGAGAAAAACCTGGTTGATGGCACCAATCGTGGTTATGGCAGCATTTGGGCTAGTAGCTGCGGATTCTGTACATCCCTCAGTAGCAGCAAACGTACCTACAGTTAACGTTTCCCAGTTAGCTAACAATATGCTGCAAGAAAATCTTTACAACCAGGCAGTATCGGTTGATGAACAGGTAAAAGTAGCTACCCCTAAGGTAAGTGCTTTCTCTGCAGGCGCTTCCTCCGCTACCTCCGCGAAGAGCGAAGATGCTTCTCCGCTTCCGGCCGCCGAAACTCCCAATTGTGCCCCTCCCAGCGGGGATAGCGGGGTGCAGCCCTGGCCGCGTCAGGTACGCACTATGATTACTCAGCGTTTCGGGGTAACTAATATTGGCGGCTTGCGTCCCGGAGATCCGCGCGATCACGGTAAAGGCCTAGCTTTGGACGTAATGGTACCGGTATCCAGTGGACTTGGAGATTCCATCGCCAATTGGGCAATCGCCAATAGCGGGGATCTAAACATTAAATACGTGATCTGGAAACAAAAAATCTGGATGCCCGGGCGCAGCTGGAAAGGTATGGAAAATCGCGGTTCGATTACCGCTAACCACTTCGATCACGTACACATCAGCTTCAACAGC
PROTEIN sequence
Length: 208
VRKTWLMAPIVVMAAFGLVAADSVHPSVAANVPTVNVSQLANNMLQENLYNQAVSVDEQVKVATPKVSAFSAGASSATSAKSEDASPLPAAETPNCAPPSGDSGVQPWPRQVRTMITQRFGVTNIGGLRPGDPRDHGKGLALDVMVPVSSGLGDSIANWAIANSGDLNIKYVIWKQKIWMPGRSWKGMENRGSITANHFDHVHISFNS