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L2_040_124G1_scaffold_355

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_355_1
unknown

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1..78
DNA (78bp) protein (26aa)

This feature has no annotations

L2_040_124G1_scaffold_355_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44..856)
DNA (813bp) protein (271aa)
Xanthine/uracil permease family protein n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q123_CLONN
Permease family protein {ECO:0000313|EMBL:KIE47604.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
xanthine/uracil permease family protein
L2_040_124G1_scaffold_355_3
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1267..2259)
DNA (993bp) protein (331aa)
ansA; type II L-asparaginase (EC:3.5.1.1)
asparaginase n=1 Tax=Clostridium sp. JC122 RepID=UPI000287BB81
Asparaginase family protein {ECO:0000313|EMBL:KIE47532.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_355_4
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2515..2712)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00030A6280
Uncharacterized protein {ECO:0000313|EMBL:KIE47666.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_355_5
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3356..4831)
DNA (1476bp) protein (492aa)
Stage IV sporulation protein A {ECO:0000256|PIRNR:PIRNR007466}; EC=3.6.1.3 {ECO:0000256|PIRNR:PIRNR007466};; Coat morphogenetic protein SpoIVA {ECO:0000256|PIRNR:PIRNR007466}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
stage IV sporulation protein A n=1 Tax=Clostridium sp. JC122 RepID=UPI0002898B27
stage IV sporulation protein A
L2_040_124G1_scaffold_355_6
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5138..6142)
DNA (1005bp) protein (335aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394, ECO:0000256|RuleBase:RU000439};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
glycerol-3-phosphate dehydrogenase n=1 Tax=Clostridium sp. JC122 RepID=UPI000289FD57
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
L2_040_124G1_scaffold_355_7
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6176..7492)
DNA (1317bp) protein (439aa)
GTPase Der n=1 Tax=Clostridium sp. BL8 RepID=T0PGM5_9CLOT
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ribosome-associated GTPase EngA
L2_040_124G1_scaffold_355_8
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7494..8828)
DNA (1335bp) protein (445aa)
Fe-S oxidoreductase n=1 Tax=Clostridium sp. JC122 RepID=UPI0002898292
PDZ domain family protein {ECO:0000313|EMBL:KIE47491.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_355_9
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9254..9910)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI000312F846
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
phosphate transport system regulatory protein PhoU
L2_040_124G1_scaffold_355_10
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9922..10668)
DNA (747bp) protein (249aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702, ECO:0000256|SAAS:SAAS00042365};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Phosphate ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. BL8 RepID=T0MWA0_9CLOT
phosphate ABC transporter, ATPase subunit
L2_040_124G1_scaffold_355_11
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10687..11442)
DNA (756bp) protein (252aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702, ECO:0000256|SAAS:SAAS00042365};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002F0E975
phosphate ABC transporter ATPase
L2_040_124G1_scaffold_355_12
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11458..12369)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PGM1_9CLOT
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:KIE47440.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
pstA1; phosphate ABC transporter membrane protein 2, PhoT family
L2_040_124G1_scaffold_355_13
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12362..13261)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N567_9CLOT
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:KIE47397.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
phosphate ABC transporter, inner membrane subunit PstC
L2_040_124G1_scaffold_355_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13436..14371)
DNA (936bp) protein (312aa)
Phosphate binding protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MGW8_ALKOO
Phosphate binding family protein {ECO:0000313|EMBL:KIE47662.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
phosphate binding protein
L2_040_124G1_scaffold_355_15
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14858..16558)
DNA (1701bp) protein (567aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00031088D5
PAS domain S-box domain-containing protein
L2_040_124G1_scaffold_355_16
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16568..17272)
DNA (705bp) protein (235aa)
PhoP family transcriptional regulator n=1 Tax=Clostridium sp. BL8 RepID=T0N562_9CLOT
Alkaline phosphatase synthesis transcriptional regulatory protein phoP {ECO:0000313|EMBL:KIE47483.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
response regulator
L2_040_124G1_scaffold_355_17
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17286..18068)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0003124228
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_355_18
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18155..18610)
DNA (456bp) protein (152aa)
NrdR family transcriptional regulator n=1 Tax=Clostridium sp. JC122 RepID=UPI000289595D
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
nrdR; transcriptional regulator NrdR
L2_040_124G1_scaffold_355_19
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18697..18951)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002881827
Sporulation, YlmC/YmxH family protein {ECO:0000313|EMBL:KIE47665.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
PRC-barrel domain-containing protein
L2_040_124G1_scaffold_355_20
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19228..20001)
DNA (774bp) protein (258aa)
RNA polymerase sigma 70 n=1 Tax=Clostridium sp. JC122 RepID=UPI0002898DF9
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
sporulation sigma factor SigG
L2_040_124G1_scaffold_355_21
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20078..20803)
DNA (726bp) protein (242aa)
RNA polymerase sigma 70 n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A1D9B
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
RNA polymerase, sigma 28 subunit, SigE
L2_040_124G1_scaffold_355_22
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20818..21621)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N9U2_9CLOT
Sigma-E processing peptidase SpoIIGA {ECO:0000313|EMBL:KIE47551.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
putative sigma-E processing peptidase SpoIIGA
L2_040_124G1_scaffold_355_23
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22052..23158)
DNA (1107bp) protein (369aa)
cell division protein FtsZ n=1 Tax=Clostridium tunisiense RepID=UPI0002F28FB0
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ftsZ; cell division protein FtsZ
L2_040_124G1_scaffold_355_24
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23174..24424)
DNA (1251bp) protein (417aa)
cell division protein FtsA n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A1D4A
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ftsA; cell division protein FtsA
L2_040_124G1_scaffold_355_25
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24948..25715)
DNA (768bp) protein (256aa)
shikimate 5-dehydrogenase (EC:1.1.1.25)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0003080487
Shikimate dehydrogenase substrate binding domain protein {ECO:0000313|EMBL:KIE47527.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_355_26
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25932..26642)
DNA (711bp) protein (237aa)
RNA polymerase sigma 70 n=1 Tax=Clostridium sp. JC122 RepID=UPI0002887829
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
RNA polymerase, sigma 28 subunit, SigK
L2_040_124G1_scaffold_355_27
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27032..28708)
DNA (1677bp) protein (559aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002884138
Penicillin binding transpeptidase domain protein {ECO:0000313|EMBL:KIE47592.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
penicillin-binding protein transpeptidase
L2_040_124G1_scaffold_355_28
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28778..29401)
DNA (624bp) protein (208aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
uridine/cytidine kinase n=1 Tax=Clostridium sp. JC122 RepID=UPI000289BD35
uridine kinase
L2_040_124G1_scaffold_355_29
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29401..30630)
DNA (1230bp) protein (410aa)
peptidase U32 n=1 Tax=Clostridium sp. JC122 RepID=UPI00028947BC
Peptidase U32 family protein {ECO:0000313|EMBL:KIE47409.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
protease
L2_040_124G1_scaffold_355_30
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30596..31279)
DNA (684bp) protein (228aa)
O-methyltransferase n=1 Tax=Clostridium sp. JC122 RepID=UPI0002881967
Spermine/spermidine synthase family protein {ECO:0000313|EMBL:KIE47589.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
O-methyltransferase family protein
Displaying items 1-30 of 34 in total

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