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L2_040_365G1_public_UNK

In projects: L2_040_365G1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 40.49 Longest contig: 611.74 Kbp Bin length: 98.46 Mbp GC content: 47.09 %
Contigs count: 20686 Features count: 107071 rRNAs count: 22 tRNAs count: 1494

Genome completeness

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Displaying items 601-650 of 20686 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L2_040_365G1_scaffold_11380
Species: Lachnospiraceae bacterium M18-1 (100%)
2 1571 bp 48.50 4.58 100.45
L2_040_365G1_scaffold_11382
Species: Peptoclostridium difficile (50%)
2 1571 bp 66.26 3.63 100.45
L2_040_365G1_scaffold_18017
Species: Lachnospiraceae bacterium 2_1_58FAA (100%)
2 1123 bp 43.72 5.48 100.45
L2_040_365G1_scaffold_17949
Species: [Ruminococcus] gnavus (100%)
2 1126 bp 43.16 3.73 100.44
L2_040_365G1_scaffold_16355
Species: RLO_PLX_64_10 (50%)
2 1828 bp 51.70 4.68 100.44
L2_040_365G1_scaffold_17589
Species: Dorea sp. CAG:317 (50%)
2 1144 bp 48.25 4.85 100.44
L2_040_365G1_scaffold_11067
Species: [Ruminococcus] gnavus (66.67%)
3 1604 bp 45.76 4.21 100.44
L2_040_365G1_scaffold_6023
Species: Ruminococcus sp. CAG:579 (50%)
2 2533 bp 31.39 5.21 100.43
L2_040_365G1_scaffold_7704
Order: Clostridiales (66.67%)
3 2085 bp 61.49 4.03 100.43
L2_040_365G1_scaffold_13172
Species: Hungatella hathewayi (100%)
2 1410 bp 49.29 4.89 100.43
L2_040_365G1_scaffold_8175
Species: Firmicutes bacterium CAG:41 (100%)
5 2593 bp 40.69 5.67 100.42
L2_040_365G1_scaffold_16834
Species: Hungatella hathewayi (50%)
2 1180 bp 48.05 5.59 100.42
L2_040_365G1_scaffold_7469
Phylum: Firmicutes (80%)
5 2136 bp 37.22 4.78 100.42
L2_040_365G1_scaffold_16653
Species: Eggerthella lenta (66.67%)
3 1189 bp 64.09 5.17 100.42
L2_040_365G1_scaffold_7398
Order: Clostridiales (66.67%)
3 2148 bp 43.81 4.47 100.42
L2_040_365G1_scaffold_8638
Species: Hungatella hathewayi (100%)
3 1918 bp 52.19 5.01 100.42
L2_040_365G1_scaffold_4402
Species: Firmicutes bacterium CAG:41 (100%)
4 3361 bp 39.99 4.20 100.42
L2_040_365G1_scaffold_16443
Species: Hungatella hathewayi (100%)
2 1201 bp 49.63 6.37 100.42
L2_040_365G1_scaffold_12765
Species: Bacillus cereus (50%)
2 1443 bp 43.04 3.85 100.42
L2_040_365G1_scaffold_7323
Species: Streptococcus thermophilus (100%)
3 2166 bp 38.00 4.02 100.42
L2_040_365G1_scaffold_8563 3 1927 bp 28.96 3.50 100.42
L2_040_365G1_scaffold_7244
Species: Hungatella hathewayi (100%)
2 2190 bp 49.27 4.32 100.41
L2_040_365G1_scaffold_5583
Species: Clostridium sp. KLE 1755 (50%)
2 2695 bp 49.83 4.56 100.41
L2_040_365G1_scaffold_4653
Species: Coprococcus sp. HPP0074 (100%)
3 5635 bp 35.95 5.54 100.41
L2_040_365G1_scaffold_8357
Species: Firmicutes bacterium CAG:65 (50%)
2 1963 bp 51.20 4.20 100.41
L2_040_365G1_scaffold_7170
Species: Clostridium sp. CAG:7 (100%)
2 2211 bp 48.71 4.68 100.41
L2_040_365G1_scaffold_5556
Species: [Clostridium] saccharolyticum (66.67%)
3 2704 bp 48.89 4.83 100.41
L2_040_365G1_scaffold_7120
Species: Hungatella hathewayi (66.67%)
3 2223 bp 51.42 3.64 100.41
L2_040_365G1_scaffold_3436
Genus: Ruminococcus (50%)
4 6200 bp 51.06 7.26 100.40
L2_040_365G1_scaffold_20923 3 1748 bp 52.52 4.29 100.40
L2_040_365G1_scaffold_6840
Species: Bacteroides sp. D2 (50%)
2 3499 bp 43.38 5.49 100.40
L2_040_365G1_scaffold_20990
Species: Hungatella hathewayi (100%)
2 1001 bp 47.95 4.80 100.40
L2_040_365G1_scaffold_20996
Species: Hungatella hathewayi (100%)
2 1001 bp 42.66 6.29 100.40
L2_040_365G1_scaffold_20831
Species: Klebsiella oxytoca (100%)
2 1007 bp 65.94 8.49 100.40
L2_040_365G1_scaffold_20853
Species: Hungatella hathewayi (100%)
2 1007 bp 52.63 4.02 100.40
L2_040_365G1_scaffold_8078
Species: Lachnospiraceae bacterium 3_1_57FAA_CT1 (66.67%)
3 2014 bp 50.00 3.72 100.40
L2_040_365G1_scaffold_15343
Species: Coprobacillus sp. 8_2_54BFAA (50%)
2 1264 bp 32.83 3.56 100.40
L2_040_365G1_scaffold_11857
Species: Eubacterium rectale (66.67%)
3 1524 bp 45.60 5.51 100.39
L2_040_365G1_scaffold_20550
Species: Bacteroides sp. 1_1_6 (50%)
2 1019 bp 36.31 51.52 100.39
L2_040_365G1_scaffold_20385 3 1025 bp 37.46 3.95 100.39
L2_040_365G1_scaffold_5289
Species: Oscillibacter sp. 1-3 (66.67%)
3 2824 bp 36.97 4.46 100.39
L2_040_365G1_scaffold_14802
Species: Hungatella hathewayi (50%)
2 1297 bp 46.88 5.09 100.39
L2_040_365G1_scaffold_14755
Species: Campylobacter jejuni (50%)
2 1300 bp 24.62 5.54 100.38
L2_040_365G1_scaffold_9258
Species: Ruminococcus sp. CAG:57 (50%)
2 1829 bp 44.23 5.41 100.38
L2_040_365G1_scaffold_9202
Genus: Bacteroides (100%)
3 1835 bp 45.78 154.25 100.38
L2_040_365G1_scaffold_7641
Species: Clostridium bolteae CAG:59 (50%)
2 2098 bp 50.76 7.01 100.38
L2_040_365G1_scaffold_5721
Species: [Ruminococcus] gnavus (66.67%)
3 2639 bp 40.39 5.57 100.38
L2_040_365G1_scaffold_14414
Species: [Ruminococcus] gnavus (50%)
2 1321 bp 45.95 4.54 100.38
L2_040_365G1_scaffold_7566
Species: Hungatella hathewayi (100%)
2 2116 bp 55.20 5.17 100.38
L2_040_365G1_scaffold_14261
Species: Hungatella hathewayi (50%)
2 1330 bp 52.11 5.41 100.38
Displaying items 601-650 of 20686 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.