ggKbase home page

L2_041_000G1_scaffold_565_7

Organism: dasL2_041_000G1_concoct_33_fa

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 6876..8630

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box protein n=5 Tax=Clostridium difficile RepID=D5Q7N9_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 582.0
  • Bit_score: 806
  • Evalue 1.10e-230
PAS domain S-box protein {ECO:0000313|EMBL:EFH15228.1}; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP07.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 582.0
  • Bit_score: 806
  • Evalue 1.60e-230
prdR; sigma-54-dependent transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 582.0
  • Bit_score: 804
  • Evalue 1.20e-230

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1755
ATGTTTTCTATACCTAAAATCATGTTGGTAGAAGAAGTTATGGACACTAAATACTTTACAATATTAGAGGATTCAAAGATAGAAGATGTACTGTTTGAGATAATAAAAAACAACGTTAAGACACTATTAGCAATTGATATAGAAGGTAAGTTGACAGGAATGATATCTATAACTGATCTGAGCTGTTTAGTTAATAAACACATGAATTATAAAAATTTAAAAGTTAAAGATGTAGTGAAAACAAAAGTAGTATCTGTAACCAAAGGAATATCGTTATATGAATGTAAAGATATAATGTTAAATAATGAAATTGATTTTTTACCTGTTTTGGAGCAAGAAAATATTATTGGAACCATAAGTCTGGAACATATAAGAGATTATCATTACATGTTATTAGAAGATTATGAAATGACCTTAAAATACATTATCAGCCATATAAAAGAGGGAATATATGCGACAAATAAAGATGGTGAAGTAATACTATGGAATAAATTTATGGAAGATCGATATGATATTAATTCAAAAGATATTGTTGGGAAACATATGAATCTATTTCTAAAAAACACAATAAGTGAAAAGGTTATACTTAGTAAGAATGAAATGAGTGATTTGTATTTCAATGATAAGAAAGAAAATTTGTATGCGCTCGTTCATGTGAATCCAGTGTTCTATAATAGTGAATTTATAGGAGTGGTTGGAACTGAAGTTGATATTATAGATGCAAAAAATATATCAATACAGCTTGAAAAAGTAAATGATACTTTAAACTATTTGAAAGATGAGGTAAAGAGTTTATCAAAGGGAAGTTTTGATAATATTTTAGGAAACAGTTTTAAGCTTGAAAAGTCAAAAGCTATTGCTAAGCAGGTAGCAAAGACTAATAGTAGTATTCTAATCCTGGGTGAAAGTGGTACTGGAAAAGAAGTATTTGCAAGAGCTATACACAACTATAGTGAAAAAAAAGGTCAGTTTATACCAGTTAACTGCAGTGCAATACCTAAAGAATTATTTGAGAGTGAGTTTTTTGGCTATGAGGCAGGTGCATTTACAGGAGCAAGGGACAAAGGAAAAATGGGACTTTTTGAATTAGCGAATAACGGAACTTTATTTTTAGACGAAATTGCTGATTTACCACGTGCTATGCAGGCGAAACTTTTGAGAGCTCTTCAAGAGAAAGAGATCAGAAGGGTAGGAGGAAGTAAGACGATCAAAATTAATCCTAGAATTATTTCTGCCACAAATAAAGATTTAGAAGAGTTGGTTAGAGAAGAAAAATTTAGAGAAGATTTATATTATAGGTTAAATGTCATCGAAATTAATATACCACCATTACGTGAAAGAAAAGAAGATATAGGCATTCTTACACATAGCTTTTTAAAAGAGATTTGTGATAATAATAATAAAAAAATAATTAAGTTAGATAATGAAGTCATACGAGCTTTTCAAAATTATAAATGGAAAGGCAATATAAGGGAGCTTAAAAATACTATAGAAAATATAGTAGTTCTATCAGAAAAACAAAATATTACAACAGATGATATACCTGGTTATATTTTAGAATCTTCAAATTTAAGTTTGGAAGATACTTCATATCCTTTGGATTTAAGTAAGGCAAGGAGTGAGACAGAAATTAAACATATAAATAAGGCATTAAAAGTAAGCGACGGGAATAAATCAACAGCCGCTAAGCTCTTGAATATACCAAGATCGACATTATACTATAAGATGGATCAATATAATATAGAGAATAATTAG
PROTEIN sequence
Length: 585
MFSIPKIMLVEEVMDTKYFTILEDSKIEDVLFEIIKNNVKTLLAIDIEGKLTGMISITDLSCLVNKHMNYKNLKVKDVVKTKVVSVTKGISLYECKDIMLNNEIDFLPVLEQENIIGTISLEHIRDYHYMLLEDYEMTLKYIISHIKEGIYATNKDGEVILWNKFMEDRYDINSKDIVGKHMNLFLKNTISEKVILSKNEMSDLYFNDKKENLYALVHVNPVFYNSEFIGVVGTEVDIIDAKNISIQLEKVNDTLNYLKDEVKSLSKGSFDNILGNSFKLEKSKAIAKQVAKTNSSILILGESGTGKEVFARAIHNYSEKKGQFIPVNCSAIPKELFESEFFGYEAGAFTGARDKGKMGLFELANNGTLFLDEIADLPRAMQAKLLRALQEKEIRRVGGSKTIKINPRIISATNKDLEELVREEKFREDLYYRLNVIEINIPPLRERKEDIGILTHSFLKEICDNNNKKIIKLDNEVIRAFQNYKWKGNIRELKNTIENIVVLSEKQNITTDDIPGYILESSNLSLEDTSYPLDLSKARSETEIKHINKALKVSDGNKSTAAKLLNIPRSTLYYKMDQYNIENN*