ggKbase home page

L2_041_000G1_scaffold_5840_4

Organism: dasL2_041_000G1_metabat_metabat_39_fa_fa

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 1
Location: 2604..3326

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDF2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 239.0
  • Bit_score: 415
  • Evalue 3.00e-113
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 239.0
  • Bit_score: 415
  • Evalue 4.30e-113
putative RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 238.0
  • Bit_score: 300
  • Evalue 4.00e-79

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcaceae bacterium D16 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 723
ATGAATGGGACGCCCACCGCCCCGGAGCTGCTGGAGGCCGCCAGGAACGGGGACAACCGGGCCTGTGAGCAGGTGCTGGAGGAGAACAACGGCCTCATATGGTCCGTGGTGCGCCGGTACTACGGCCGGGGGGTGGAGCCGGACGACCTGTACCAGCTGGGCTGCCTGGGTTTCCTCAAGGCGGTGCGGGGCTTTGACCCCGCCTTCGGCACCCAGTTCTCCACCTACGCGGTGCCCAAGATCGCCGGGGAGATCCGCCGATTCCTTCGGGACGACGGGGCGGTGAAGGTGAGCCGGGGGCTGAAGGAGCGGAGCATCTCCCTCCGGGGGGTCCGGGCCCGGCTGTGCGGGGAGCTGGGGCGGGAGCCCGCCCTGTCCGAGCTGGCGGAGGCCACCGGCCTGACCCCCGAGGAGATCGCCGCGGCGGAGACCGCTGCCGAGCCGGTGATTTCCCTCCAGACGGAGACGGGGGAAGGGGGGCTGACCCTGGAGGGGATGCTCACCAGCGGGGGGATGGAGGAGGGACTCATTGAGCGGCTGTCCCTGCGCTCCGCCCTGGAGGAGCTGCCGGAGCGGGAGCGCCAGGTGCTGCTGCTGCGGTACTACAAGGGGCTGACCCAGACCCAGTCGGCCAAGGTGCTGGGGGTGTCCCAGGTGCAGATCTCCCGGCTGGAGCGGCGGGCGGTGGACCGGCTGCGGCAGATGCTGGCCCCGCCGGAATAA
PROTEIN sequence
Length: 241
MNGTPTAPELLEAARNGDNRACEQVLEENNGLIWSVVRRYYGRGVEPDDLYQLGCLGFLKAVRGFDPAFGTQFSTYAVPKIAGEIRRFLRDDGAVKVSRGLKERSISLRGVRARLCGELGREPALSELAEATGLTPEEIAAAETAAEPVISLQTETGEGGLTLEGMLTSGGMEEGLIERLSLRSALEELPERERQVLLLRYYKGLTQTQSAKVLGVSQVQISRLERRAVDRLRQMLAPPE*