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L2_047_000G1_scaffold_4543_5

Organism: dasL2_047_000G1_concoct_18_fa

near complete RP 48 / 55 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 4156..5001

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Sporolactobacillus vineae RepID=UPI00028960B6 similarity UNIREF
DB: UNIREF100
  • Identity: 39.4
  • Coverage: 279.0
  • Bit_score: 219
  • Evalue 2.20e-54
Helix-turn-helix domain, rpiR family protein {ECO:0000313|EMBL:EQK45982.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.9
  • Coverage: 265.0
  • Bit_score: 205
  • Evalue 6.00e-50
RpiR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 264.0
  • Bit_score: 198
  • Evalue 1.90e-48

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Taxonomy

[Clostridium] bifermentans → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 846
ATGAATTTATTTGATAATATAAAAATTAAGTATAACAAATTAACCTCAAGTGAGATGAAAATTGCAGATTTTATAATAAAAAATCATAAAAAAGTTTTAGAAATGAGTGCAAAAGAAATTGGAGATGAAACTAAAACTTCAGCAGCTACTGTAGTTAGATTTTGTAAAAAGATAGATATAGATGGATTAGATACTCTAAAAGTAAAAATAGCACAGAGTTCTTTTGAAAATAAGGAGAGTACTGAAATAGATCCAATATTAAGTAAAGATGATTCTATGGTAGACATAATAAATAAAATATACACAAATGTTGAGGTTGGTTTGAAAAGAGCGGTTTCATTATTAGTGGTTGAAACATTAGAAAAAGTAGTAGAACTAATGAAGAGGTCTAATGGAATATATATTTATGCAATAGGTTCATCAGGATTGTGTGCATATGATTTATATCATAAATTAAATAGGGTAAATAAGAAAACATATTACAATCAAGACCCAACAATGAGTATAGAGTTTTCAGCATATACAAAGCCAGATGATGTTGTAATTGCTATATCTTATAGCGGTAATTCAAGGGAGGTTTTACTTGCTGTTGAAGAGTCTAAAAAGCAGAATACACCTATTGTTGCTATAGTTAAGGAAGGGAAGACTAGACTTGGGGAATTAGCAGATTATTGTTTGTATATACCCAATAAAGAGAAAAAGGTAAGAATAGGTTCCCTTGAATCAAAATTTTCTCAAATGTTAATAGCAGATATATTATATTATGCAGTAGCTAAGGAGAATATGGATTCTTTTATAGAATATTTAAAGGATATAAGTGATAAAATTGGAAAATTTAAAGGATAA
PROTEIN sequence
Length: 282
MNLFDNIKIKYNKLTSSEMKIADFIIKNHKKVLEMSAKEIGDETKTSAATVVRFCKKIDIDGLDTLKVKIAQSSFENKESTEIDPILSKDDSMVDIINKIYTNVEVGLKRAVSLLVVETLEKVVELMKRSNGIYIYAIGSSGLCAYDLYHKLNRVNKKTYYNQDPTMSIEFSAYTKPDDVVIAISYSGNSREVLLAVEESKKQNTPIVAIVKEGKTRLGELADYCLYIPNKEKKVRIGSLESKFSQMLIADILYYAVAKENMDSFIEYLKDISDKIGKFKG*