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L2_047_000G1_scaffold_8179_3

Organism: dasL2_047_000G1_concoct_18_fa

near complete RP 48 / 55 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 2502..3182

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 224.0
  • Bit_score: 308
  • Evalue 4.00e-81
rluF; Ribosomal large subunit pseudouridine synthase F (EC:5.4.99.21) similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 220.0
  • Bit_score: 303
  • Evalue 2.60e-80
Pseudouridine synthase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8D4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 223.0
  • Bit_score: 299
  • Evalue 1.80e-78

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Taxonomy

Clostridium novyi → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 681
ATGAGAATTAATAAGTTATTAAGCAATTATGGATACTGCTCTAGGAAGGAAACTAATAAGCTTATTCAAGATAAAAGGGTTATAGTGAATGGAGAACTAGCAATAGAGGGACAATGGGTTGAGGAAAGTGATACTATACTTTTAGATAATGTAAGAGTAAAACCTAAGGATAAGGTATATGTTGCTTTTAATAAACCAGTAGGAATTGTTTGTACAGCAGCAAAGGAAACTGAAAATAATATTATAGATTATGTTGATTATCCTGAATATATTTTTCCAATTGGAAGGCTAGATAAACCTTCTCAGGGATTGATTTTATTAACTAATGATGGAGATTTAGCTGATAAAATATTAAGCTCTGAAAACTATCATGAGAAGGAGTATATAGTTGAAGTAGATAAAGATATAGATGATGAATTTATTTTAAATATGTCCAATGGAATTAAAATAGGGGATAGGATAACTAGAAAATGTAAGGTTAAAGCTTTAGGTGAAAAGAAGTTTTCTATTATATTAACAGAAGGCATGAATAGGCAAATAAGAAAGATGTGTAAGTCTTTAGGATATGAAGTTACATTGTTAAAGAGAATTAGAATTATGAATATTTTAATTGATGGAATAGAGGAAGGAAAGTGGAGAAATCTGAGTATTAAGGAAATAAATACTTTGAAAAATGGATAA
PROTEIN sequence
Length: 227
MRINKLLSNYGYCSRKETNKLIQDKRVIVNGELAIEGQWVEESDTILLDNVRVKPKDKVYVAFNKPVGIVCTAAKETENNIIDYVDYPEYIFPIGRLDKPSQGLILLTNDGDLADKILSSENYHEKEYIVEVDKDIDDEFILNMSNGIKIGDRITRKCKVKALGEKKFSIILTEGMNRQIRKMCKSLGYEVTLLKRIRIMNILIDGIEEGKWRNLSIKEINTLKNG*