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L2_047_000G1_scaffold_2984_2

Organism: dasL2_047_000G1_concoct_43_fa

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38
Location: comp(872..4450)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 1192.0
  • Bit_score: 2320
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Actinomyces sp. ICM39 RepID=J3EEY7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 1192.0
  • Bit_score: 2320
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 1199.0
  • Bit_score: 1488
  • Evalue 0.0

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Taxonomy

Actinomyces sp. ICM39 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3579
GTGCTACTCACCGGACTCCTCCCGGACATCACCACCGATCCCGCGATCGAGACGGCCATCGACTCCGTCGAAGCCGGCCGTTCCGGCACGATCGTCGCGCCCGTCGGCATCCGGCCGCCACTCCTTGCGGCCGTCGCCTCGCGCGCGGCCACGCCCCTCGTCGTCCTGACGGCCACCGGGCGTGACGCCGAATCGCTGACCAACGCCCTGGCCTCGTGGATCCCGGGCGTGGCCATGCTGCCCGCGTGGGAGACCCTGCCCCACGAGCGACTCTCGCCCCAGGTCGACACGATGGCGCGTCGCATCGCCGTCCTGCGCCGCCTCGTCCACCCGATCAAGGGAGACGACAGCGCCGGTCCGATGTCGGTCCTCGTCGTCCCCATCCGCGCCTTCCTCCAGCCGATCATCTCCGGCCTGGCGGACCTCGAACCCGTGCGCGTGCGCACCGGCGACATCCTGGACCTGACCGAGACCACGAATCGCCTGGCCGAGCTCGGCTACGAGCGCGTCGACATGGTCGAAGGCCGCGGCCAGATGAGTGTGCGCGGTGGCATCCTCGACGTCTTCCCGCCCCAGGAACCCCACCCCCTGCGCGTGGAGCTGTGGGGGGACGAGGTCGACGACATCCGCGCCTTCTCCGTCTCCGACCAGCGAACCCTCGGCGAGGCCGCCGACGGCCTGTGGGCCGTCCCCTGCCGTGAGCTTCTCCTCACCCAGGCCGTACGTGCCCGAGCCCGCGAGGCCGCCGACCGCCTTCCCGGCGCCGCCGAGATGCTCAGCCTCGCCGCCGAAGGAATCGCCGCACCCGGCATCGAATCCCTCGCACCCATCCTCGTGGGCGGCATGGAATCACTCCTCGACCTGCTGCCCGCGGGCTCGCCGATCCTCGCCTCCGACCCCGAACGCATCCGCGCCCGCGCCGCCGACCTCGTCGCCACGACCGAGGAGTTCCTCGCCGCCGCGTGGAGCGCCGCCGCCGGGGGAGCAGACACCCCGCTCGAGGCCTCCAAGGCCTCGTTCCTCGACCTGTCCGACCTGTGGGGGAGTGGGACGCGCCCCTGGTGGGAGCTCACCGACCTGCCGCCCGCCGACCTAGCCTCCGCGATCGACGAGGCCGACTCACCCTCAGCGGACGGCCCCACGCCCGTCGTCGTCTCACCCACCCTCATGCGCGTGGGTGCCCGCGACGTGCACCCCTACCGCGGAGACTTCGCCCGAGCCGCCGCCGACCTCACCGACCTGGCCCGCGACGGCTGGCGCATCGTCGTCACCACCGAAGGCCCCGGCCCGGGCCGACGTATCCGCTCCATCCTCACCGACGCCTCGTGCCCGGCCGCGCTCGCGGACAACGTGGAAGCGCGCCCCGACCCCGGCCTCGTGACCATTACGACCGCGCAGGCCGGCGTCGGTTTCGTCGCGCCCCACCTCAAGGTCGCGATCCTCACCGAAGGCGACCTCACCGGGCGAGCGGGCGCATCCACGCGCGACATGCGGCGCATGCCCTCGCGCAGGCGCAAGGGCGTCGACCCGCTGACCCTGCACCCCGGGGACTATATCGTCCACGACCAGCACGGCATCGGACGCTTCATCGAGCTGGTCTCCCGGTCGATCGGCCGCGGAGACGCCGCCTCGACGCGCGACTACCTGGTCATCGAATACGCGCCCTCCAAGCGTGGCCAGCCCGCCGACCGCCTCTTCGTGCCTACCGACGCGCTGGACCAGATCTCGAAGTACACCGGATCCGACGAGCCCTCGCTGACGAAGATGGGTGGCGCCGACTGGGCCAAGACCAAAGCCCGCGCCAAGAAAGCCGTCAACGAGGTCGCCAAGGAACTCATCCGCCTGTACGCCGTGCGCCAGCAGACCAAGGGCCACGCCTTCGGCCCCGACACCCCCTGGCAGCGCGAACTCGAGGACGCCTTCCCCTACGTCGAGACCCCCGACCAGCTCGTCACCATCGACGAGGTCAAGGCCGACATGGAAAAGCCCGTGCCCATGGATCGCCTGCTCACGGGCGACGTCGGCTACGGCAAGACCGAAATCGCCGTGCGCGCTGCCTTCAAGGCCATCCAGGACGGCTACCAGGCCGCCGTCCTTGTGCCCACGACCCTGCTGGTCACCCAGCATGCAGAGACCTTCGCCGAGCGCTACGCCGGCTTCCCCGTGCGCATCGGTACGCTCTCGCGCTTCTCGACCCCGAAGGAAACCGAGGAGGTCAAGGCGGGGCTGGCCTCGGGCGAGGTTGACCTGGTCATCGGCACCCACTCGCTGCTGACCGGCACGGTTTCGTTCAAGAAGCTCGGCCTCGTCATCATCGACGAGGAGCAGCGCTTCGGCGTCGAGCACAAGGAGACGCTCAAGGCCCTGCGCACCGACGTGGACGTCCTGTCGATGTCCGCCACACCGATCCCGCGTACCCTCGAGATGGCGATCTCCGGCATTCGCGAGATGTCGATCCTCCAGACCCCGCCCGAGGAACGCCAGCCGGTCCTCACCTTCGTCGGCGCCTACACGGACGCCCAGGTTAGCGCCGCGATCCGACGCGAGCTCCTGCGCGACGGCCAGGTCTTCTACGTGCACAACCGCGTCGACTCGATCTCTTCGGTCGCCGCCCACATCACCGAGCTGGTGCCCGAGGCGCGCGTGCGAACCGCGCACGGCAAGATGAACGAGCATCAGCTCGAGGCCGTCATTCAGGATTTTTGGAACCACGAGTTCGACGTGCTCGTGTGCACGACTATCGTCGAAACCGGCCTGGATATCTCCAACGCGAATACGCTCATTGTGGACCGTGCCGACATCTTCGGCCTGTCTCAGCTCCACCAGCTGCGTGGGCGCGTCGGGCGAGGCCGCGAACGCGCCTACGCGTACTTCTTCTACCCGGGCGACAAGGCGCTCACCGAGACCGCCCACGAGCGCCTCAAGACGATCGCCGCCAACACCGAGCTGGGAGCCGGCCTGGCCGTCGCTCAGCGCGACCTCGAGATCCGAGGCGCCGGTAACCTCCTGGGAGGGGCCCAGTCCGGCCATGTCGAGGGAGTTGGCTTCGACCTGTACGTGCGCATGGTCTCCGACGCTGTCGCCGCCTACCGAGGCGACGCCCCCACCGAAAAGACGGACGTGCGCATGGACCTGCAGGTCGATGCGCACATTCCCGACGGCTACGTGCGCGGCGAGCGCCTGCGCCTGGAGGTCTACGCCAAGATCGCGGCCATCTCCACGCCTGAGCAGGAGGCCGATGTGCGCGAGGAACTCGTCGACCGATACGGTCCGATCCCGCCCCAGGTCGACCTGCTCTTCGCCGTCGCACGGCTGCGCGAAGTTGTGCGCCGCGCCGGGATCGCCGAGATTGTCACGCAGGGCAAGTACCTGCGTGTCTCGCCCGTCGAGCTGCGCGATTCCCAGGTCATGCGCCTCAAGCGCCTGCATCCTGGAACCGTCATCAAGGCCGCGGTTCGCCAGGTCCTCGTGCCCCTGCCGCTCACCTCGCGAGTCGGCGGTTCCCCGCTCACCGACGGTCCGCTCCTGGAGTGGGTGGAGACTTTGGTGACCAAGATTCTTGTGCCTTTTGGCGAGTAG
PROTEIN sequence
Length: 1193
VLLTGLLPDITTDPAIETAIDSVEAGRSGTIVAPVGIRPPLLAAVASRAATPLVVLTATGRDAESLTNALASWIPGVAMLPAWETLPHERLSPQVDTMARRIAVLRRLVHPIKGDDSAGPMSVLVVPIRAFLQPIISGLADLEPVRVRTGDILDLTETTNRLAELGYERVDMVEGRGQMSVRGGILDVFPPQEPHPLRVELWGDEVDDIRAFSVSDQRTLGEAADGLWAVPCRELLLTQAVRARAREAADRLPGAAEMLSLAAEGIAAPGIESLAPILVGGMESLLDLLPAGSPILASDPERIRARAADLVATTEEFLAAAWSAAAGGADTPLEASKASFLDLSDLWGSGTRPWWELTDLPPADLASAIDEADSPSADGPTPVVVSPTLMRVGARDVHPYRGDFARAAADLTDLARDGWRIVVTTEGPGPGRRIRSILTDASCPAALADNVEARPDPGLVTITTAQAGVGFVAPHLKVAILTEGDLTGRAGASTRDMRRMPSRRRKGVDPLTLHPGDYIVHDQHGIGRFIELVSRSIGRGDAASTRDYLVIEYAPSKRGQPADRLFVPTDALDQISKYTGSDEPSLTKMGGADWAKTKARAKKAVNEVAKELIRLYAVRQQTKGHAFGPDTPWQRELEDAFPYVETPDQLVTIDEVKADMEKPVPMDRLLTGDVGYGKTEIAVRAAFKAIQDGYQAAVLVPTTLLVTQHAETFAERYAGFPVRIGTLSRFSTPKETEEVKAGLASGEVDLVIGTHSLLTGTVSFKKLGLVIIDEEQRFGVEHKETLKALRTDVDVLSMSATPIPRTLEMAISGIREMSILQTPPEERQPVLTFVGAYTDAQVSAAIRRELLRDGQVFYVHNRVDSISSVAAHITELVPEARVRTAHGKMNEHQLEAVIQDFWNHEFDVLVCTTIVETGLDISNANTLIVDRADIFGLSQLHQLRGRVGRGRERAYAYFFYPGDKALTETAHERLKTIAANTELGAGLAVAQRDLEIRGAGNLLGGAQSGHVEGVGFDLYVRMVSDAVAAYRGDAPTEKTDVRMDLQVDAHIPDGYVRGERLRLEVYAKIAAISTPEQEADVREELVDRYGPIPPQVDLLFAVARLREVVRRAGIAEIVTQGKYLRVSPVELRDSQVMRLKRLHPGTVIKAAVRQVLVPLPLTSRVGGSPLTDGPLLEWVETLVTKILVPFGE*