ggKbase home page

L2_047_000G1_scaffold_106_22

Organism: dasL2_047_000G1_concoct_61_fa

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(23962..24858)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=1 Tax=Varibaculum cambriense RepID=UPI0003B6E374 similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 298.0
  • Bit_score: 562
  • Evalue 2.50e-157
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 277.0
  • Bit_score: 534
  • Evalue 7.80e-149
30S ribosomal protein S3P similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 283.0
  • Bit_score: 409
  • Evalue 5.90e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGGGACAAAAGGTTAGCCCTACCGGTTTCCGGTTAGGTATTACCACCGATCACCGTTCCCGCTGGTTCTCGGACTCCACTAAGCCGGGACAGCGTTACAGTGATTTCGTAGATGAAGATGTGCGCATTCGCAAGGTCATGGAAAAGAGCCTAGAGCGCGCCGGGATTTCGCAGATCGATATTGAACGTACCCGCGATCGGGTACGGGTTGATTTGCATACTGCTCGCCCCGGTATCGTTATTGGCCGGCGCGGCGCAGAGGCAGATCGCCTGCGTGGCGATTTGGAGAAGCTCACCGGTAAGCAGGTGCAGCTGAACATCCTCGAAGTTAAGAATCCTGAGATTGATGCGCAGCTAGTGGCGCAAGGAATCGCGGAACAGCTCGCGGCGCGCGTATCGTTTAGGCGCGCAATGCGTAAAGGTATGCAGTCGGCGCTGCGCGGGGGAGCCCTCGGGATCCGGGTGCAGTGCTCGGGTCGTTTGGGCGGGGCAGAAATGTCACGTTCAGAGTTTTACCGCGAAGGTCGGGTGCCGTTGCATACGCTGCGCGCCCTGATCGACTACGGCTTCTATGAAGCTCACACCACTTTCGGACGGATCGGCGTGAAAGTGTGGATTTATAAAGGCGATCTCACCGAAACCGAATTCGCCCGGAAACAGGCTGAATCCGGTGGACGCGGTGGACGCGGCAGTGGACGTCGCGGCCGCGCAGGTCGAGATGGCGGACGCGGCGGACGTCGCGGCCGTAGCGAAGGCCGGCAAGAGGGCGCAACCCAGGCACCGGCGGAAAACTCCGATGCCGCGTCCTCGGAAAAAGAGGCACCCGCAGCTGAGGCTGCTACCGAAAAGGCAGTAGCCGAGGCCGATAAGCCGCAAGAAAACGGAACGGAGGAGTAA
PROTEIN sequence
Length: 299
MGQKVSPTGFRLGITTDHRSRWFSDSTKPGQRYSDFVDEDVRIRKVMEKSLERAGISQIDIERTRDRVRVDLHTARPGIVIGRRGAEADRLRGDLEKLTGKQVQLNILEVKNPEIDAQLVAQGIAEQLAARVSFRRAMRKGMQSALRGGALGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRALIDYGFYEAHTTFGRIGVKVWIYKGDLTETEFARKQAESGGRGGRGSGRRGRAGRDGGRGGRRGRSEGRQEGATQAPAENSDAASSEKEAPAAEAATEKAVAEADKPQENGTEE*