ggKbase home page

L2_047_000M1_scaffold_641_8

Organism: L2_047_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 15
Location: comp(5654..7582)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirD4 components n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L9I1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 647.0
  • Bit_score: 1204
  • Evalue 0.0
Type IV secretory pathway, VirD4 components {ECO:0000313|EMBL:CBL16276.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 647.0
  • Bit_score: 1204
  • Evalue 0.0
Type IV secretory pathway, VirD4 components similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 647.0
  • Bit_score: 1204
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus bromii → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1929
ATGCCGTCAAGTGTTATAACTCTGATTATTGTTGCAGGCTCAATGTTTGCCTTGTTCATAATAATTTCTACGGTCGGCAATTACTATTCACTCAACCGTATAAAGAATAAGACAGTCGGTCAAGGTCAGCACGGCACGGCTCGTTGGGCGACCAAAAAGGAAGTCAAAAAAACATACAAACGAATTGATTTTCAGCCTAACGAGTGGAGAAATAATCCAGACAGCAGACCAAAGGAGCAAGGTATAGTTGTTGGCTGTAAGAACAGCAGGAAAGGAACAACCGCAATGGTTGATACTGGCGATGTGCATGCTCTGATGATTGGTGCGGCCGGTGTCGGCAAGACTGCATTTTGGCTTTATCCATGCATTGAATATGCCTGTGCAACGGGTATGTCATTTTTATCAACCGACACAAAGGGTGACATTGTTCGAAACTACGGAACGATTGCGGAAAAGTACTACGGCTACAAAATTTCAGTCATAGACTTGCGTAATCCTACACGCTCACACGGCAACAATCTCCTGCATCTTGTGAATAAGTATATGGACTTATATAAAGCCGAGCCCGAACAGCTTGTTTACAAGGCAAGAGCCGAAAAATACGCAAAAATCATTTCAAAAACGATTATTCTTTCAGGTATGGACTCGGCTTCATTCGGACAGAACGCTTACTTTTATGATGCGGCAGAGGGACTTTTAACAGCAACTATTCTGCTTGTTTCGGAATTCTGCAAACCCGAAGAACGGCATATTGTTTCGGTATTCAAAATCATTCAGGAATTACTCGCTCCGACCAATAAGAAAGGCAAAAATCAGTTTCAACTTTTAATGGACTATCTTCCCGACGACCACAAGGCAAAATGGTTTGCAGGGGCGGCTCTAAATACCGCTGAACAAGCTATGTCAAGCGTTATGAGTACGGCACTTTCAAGGCTGAATGCTTTTCTGGATTCCGAGCTTGAACAGCTTTTGTGTTTTGATACAGAAATAGACGCTGAAAAATTCTGCAATGAAAAGTGTGCAATATTCATTGTAATGCCCGAAGAAAACCCCAACACCTTCTTTATGGTGTCACTCATAATCCAACAGCTCTACCGTGAAATACTTTCAGTTGCAGATGAAAATGGAGGTGTGCTGAAAAATCGTTGTGTGTTTTTCTGCGATGAGTTTGGAACTTTACCAAAGATTGATTCAGCAGAAATGATGTTTTCAGCCTCCCGTTCAAGGCGGTTGCAGATAGTACCAATCATTCAATCCTTTGCACAGCTGGAGAAGAATTACGGCAAAGATGGTGCTGATGTTATCATAGATAACACACAGTTGACCATTTTCGGCGGCTTTGCTCCAAACAGCACAAGTGCGGAAGTCCTATCAAAAGCACTCGGTTCAAGAACTGTTATGTCAGGCTCTGTAAGCAGAAGCAAAAATGATCCGTCCCAATCATTGCAGATGATAGAAAGACCATTGATGACTCCCGATGAATTGAAGTCACTTCCAAAAGGAACGTTTGTAGTGATGAAAACAGGATTTTATCCGATGAAAGTTAAGCTAAAGCTTTTCTTTAAATGGGGCATAGAATTTGAAGAAAAGTATGAGGTCATGGAAAACGGCAACCGTGAGGTTCACTATGCCAACCGTTCGGAGTTGTTCAACAACATAATCCAAACATACTGCCCTCACTATCTTGAACAGACTGTTACTGATTCGGATTTTGATGAGGCAAGCAGTGAGAAAAAGAAGAAAAATGAAAACCTAAAGACCTCGCCAGATACAGAACAGACCGAGAGTGAAGATACTATTAATTCAGAACAGCAAAATGATCCAACAGAAGAACCTGAAAATTCAAGCATTGAACAGAGCGCAGACAAGCAAAGAAAAGTAGTCATAAGAACCGAAAGACCAACGCAGGAGGACATCAGCAATGAGTAG
PROTEIN sequence
Length: 643
MPSSVITLIIVAGSMFALFIIISTVGNYYSLNRIKNKTVGQGQHGTARWATKKEVKKTYKRIDFQPNEWRNNPDSRPKEQGIVVGCKNSRKGTTAMVDTGDVHALMIGAAGVGKTAFWLYPCIEYACATGMSFLSTDTKGDIVRNYGTIAEKYYGYKISVIDLRNPTRSHGNNLLHLVNKYMDLYKAEPEQLVYKARAEKYAKIISKTIILSGMDSASFGQNAYFYDAAEGLLTATILLVSEFCKPEERHIVSVFKIIQELLAPTNKKGKNQFQLLMDYLPDDHKAKWFAGAALNTAEQAMSSVMSTALSRLNAFLDSELEQLLCFDTEIDAEKFCNEKCAIFIVMPEENPNTFFMVSLIIQQLYREILSVADENGGVLKNRCVFFCDEFGTLPKIDSAEMMFSASRSRRLQIVPIIQSFAQLEKNYGKDGADVIIDNTQLTIFGGFAPNSTSAEVLSKALGSRTVMSGSVSRSKNDPSQSLQMIERPLMTPDELKSLPKGTFVVMKTGFYPMKVKLKLFFKWGIEFEEKYEVMENGNREVHYANRSELFNNIIQTYCPHYLEQTVTDSDFDEASSEKKKKNENLKTSPDTEQTESEDTINSEQQNDPTEEPENSSIEQSADKQRKVVIRTERPTQEDISNE*