ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

L2_047_000M1_scaffold_1008_16

Organism: L2_047_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 15
Location: comp(19148..19822)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JRG5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 224.0
  • Bit_score: 447
  • Evalue 6.70e-123
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDE65422.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 224.0
  • Bit_score: 447
  • Evalue 9.40e-123
Predicted transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 222.0
  • Bit_score: 396
  • Evalue 5.00e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alistipes putredinis CAG:67 → Alistipes → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 675
ATGACGGGGGATCGCTTAAAACTATTGAGAAAAACAATAGGACTGACACAAGAGCAGTTAGCTCAACGATTAGGCATCGGAAAGGCCGCCCTTTCGATGATCGAAACGGGCAAGGCGGCGCTCTCGTCCCGGAACAAGAACATCCTGGTTCAAGAATTGAATGTCAATCCGGACTGGCTCGACGGCGGAGAAGGGGAAATGTTCAATGCCGAACCCGATCTGACCGCCTACATGCACCGCACGGACAACACGCTGCCGCTGCAAAGCGTCCCCCTCTACTCCATAGAAGGGACGGCGGGCCTGGTGCCGCTCTTCGCCGATCACGCGCAGACGCGGCCCGTCAATTTCATCCATATCCCCAACCTGCCCAAGTGCGACGGTGCCATCTATATCGTGGGCGACTCGATGTACCCGCTGCTCAAAAGCGGCGACATCGTACTTTACAAACAGCTCAAGGATATCGGCGACATCTTCTGGGGCGACATGTACCTGCTCTCGATCGACATCGACGGCGAAGAGTACATCACGGTCAAATACATCCAAAAATCCGAGCGGGAAGGGTACGTGAAACTCGTCAGTCAGAACCCCCATCACGCCGACAAAGAGGTGGCCGTGGACCGCATCCGGGCCCTCGCCCTGGTCAAGGCCAGTATCCGGATGAATTCGATCCGGTAG
PROTEIN sequence
Length: 225
MTGDRLKLLRKTIGLTQEQLAQRLGIGKAALSMIETGKAALSSRNKNILVQELNVNPDWLDGGEGEMFNAEPDLTAYMHRTDNTLPLQSVPLYSIEGTAGLVPLFADHAQTRPVNFIHIPNLPKCDGAIYIVGDSMYPLLKSGDIVLYKQLKDIGDIFWGDMYLLSIDIDGEEYITVKYIQKSEREGYVKLVSQNPHHADKEVAVDRIRALALVKASIRMNSIR*