ggKbase home page

L2_047_000M1_scaffold_26514_3

Organism: L2_047_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 15
Location: comp(368..1081)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Ruminococcus RepID=C6JFW4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 237.0
  • Bit_score: 453
  • Evalue 7.60e-125
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 237.0
  • Bit_score: 453
  • Evalue 1.10e-124
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, sigma-B/F/G subfamily similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 237.0
  • Bit_score: 323
  • Evalue 3.40e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus sp. CAG:9 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 714
ATGGACCATACTCTTGCTCTGATCATGAAGTCACAACAGGGGGATAAAGAAGCAAGAGATACTGTATTTAAAGAAAACGCAGGACTTGTGTACAGCATGGCGAAAAGATTTGCAGGGCGCAGTGTGGAAATGGAAGATATCGTGCAGATAGGAAGCATTGGGCTACTGAAAGCCATAGATCGTTTTGATATTTCGTACGATGTGAAGTTTTCAACTTATGCTGTTCCCATGATCATAGGTGAAATCAGACGCTATCTGAGGGATGACGGGATGCTTAAGGTGAGCAGAAACCTGAAAGAGAACTGTGCCAGAATTTATTCTGCGAGAGAAGCACTGGAAAAAGAACTGGGACGTGAACCGATACTGGAGGAAGTTGCGAAAGCGACAGAACTTTCAGTAGATGAAGTGGTGATGTCGATGGAATCAGGAGCTGAAGTGGAATCTTTGCACAAAATTATCTATCAGGGAGATGGAAATGATATTTCGCTTATGGACAGGCTCCAGGAAAAAGAAAATGGACAGGATGCAGCACTGAACAGGATTTTTCTGGATGAAATCCTGAAAAAACTGGATGCAAGAGAACGTCAGCTGATCGGTATGAGATATTTTAAGGATATGACGCAGACGGAGATTGCGGCAGAGATGGGAATTTCCCAGGTCCAAGTGTCCAGGATGGAAAAGCGGATTCTGAAGGAACTTAAAAAGCAGGTATAA
PROTEIN sequence
Length: 238
MDHTLALIMKSQQGDKEARDTVFKENAGLVYSMAKRFAGRSVEMEDIVQIGSIGLLKAIDRFDISYDVKFSTYAVPMIIGEIRRYLRDDGMLKVSRNLKENCARIYSAREALEKELGREPILEEVAKATELSVDEVVMSMESGAEVESLHKIIYQGDGNDISLMDRLQEKENGQDAALNRIFLDEILKKLDARERQLIGMRYFKDMTQTEIAAEMGISQVQVSRMEKRILKELKKQV*