ggKbase home page

L2_047_000M1_scaffold_282_1

Organism: dasL2_047_000M1_concoct_38_fa

near complete RP 46 / 55 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(471..1178)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RL94_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 235.0
  • Bit_score: 461
  • Evalue 3.60e-127
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 235.0
  • Bit_score: 461
  • Evalue 5.10e-127
RNA polymerase, sigma 27/28 subunit, RpsK/SigK similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 235.0
  • Bit_score: 460
  • Evalue 2.30e-127

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Eubacterium siraeum CAG:80 → Eubacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 708
ATGTTTATATCGGTACTGCAAACCGCACTGCAGAGCCTTATCTTCTTTGCTCTGCATTTTAAAAGCAACGGTTCATTTCCCAGACAGCTTTCCGCAAAGGAAGAACGTGAATGCCTTGAAAAAGCGGCTCAGGGCGACCTTGCCGCCCGTGACAAGCTGATAAACCACAACCTTCGCCTTGTGGCATATATCGTAAAAAAGAACTACCCCGACAGCAAGGAAGCGGACGATCTTATCTCGATAGGCATAATCGGGCTTATCCGTGCCGCAGAAACCTTTGATTACAGAAAGAACATCAGCTTTTCCACCTATGCGGGAAAATGCATAAATAATCAGATAAGAATGTACTTCCGTAAAACAAAGCATCAGCAGACGGAGGTTTATATGAACGACCCGATGGACTGCGACAAGGACGGAAACGCCGTCACCCTTGCCGATATTTTCAAGGACGGAACGGACGTTGCCGAGGAGGCCGCTCTTAACATCGAGCTTGATAAAATGTACAGATATATAGACGAGGAGCTTGACGAGCGTGAAAAAGAAATACTTACAAAGCGTTACGGTCTGTCTAAAACATCCTACCGCACCGACAGGATAATGACCCAGCGTGAAGTCGCAGACGAGCTTGGCATAAGCAGGAGCTATATTTCAAGAATAGAAAAGAAAGCCCTCGAAAAGCTCCGCTCACGCTTTGAAAAAGGAGATTGA
PROTEIN sequence
Length: 236
MFISVLQTALQSLIFFALHFKSNGSFPRQLSAKEERECLEKAAQGDLAARDKLINHNLRLVAYIVKKNYPDSKEADDLISIGIIGLIRAAETFDYRKNISFSTYAGKCINNQIRMYFRKTKHQQTEVYMNDPMDCDKDGNAVTLADIFKDGTDVAEEAALNIELDKMYRYIDEELDEREKEILTKRYGLSKTSYRTDRIMTQREVADELGISRSYISRIEKKALEKLRSRFEKGD*