ggKbase home page

L2_047_000M1_scaffold_495_35

Organism: dasL2_047_000M1_concoct_38_fa

near complete RP 46 / 55 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(39502..41322)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirD4 components n=3 Tax=Eubacterium RepID=D4JUH3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 606.0
  • Bit_score: 1196
  • Evalue 0.0
Type IV secretory pathway, VirD4 components similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 606.0
  • Bit_score: 1196
  • Evalue 0.0
Type IV secretory pathway, VirD4 components {ECO:0000313|EMBL:CBK96742.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 606.0
  • Bit_score: 1196
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Eubacterium] siraeum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1821
ATGCAACAGTATGTATTTATAGTTATTATAGCAATTGTCTTTTTGGCTATGATAATATTCGCTGTTATAGGGAAGAATTACAGCCTTGACAAAATCAAGGCTCGCAAGGTCGGTAACGGACAGCACGGAACCGCTCACTGGGCGGAACACAAGGAAATTTCACAAAACTTTTCAATTCTAAAATATGAGCCGCAATTATGGCGTATGGGTGCTTGCAGACCAACAATTGACGGAACAATAGTCGGTTTTGAAAAAAAGGGGAAAGATACATACGCATTGATTGATACAAGTGATGTACATACATTGATGATTGCAGCTGCAGGAACAGGTAAAACCACATTCTTTCTTGAACCTAACATTGAATACTGCTGTGCGGCAGGTATGAGTTTTATAAGTACTGATACAAAAGGAGATATATACAGAAATTGCGGTTATGTAGCCGCAAAACGTTACGGTTATAAAATATCAGTGATAGATCTGCGGAATCCGCTTAAATCAGATGGATTTAATCTGTTACATCTTGTAAAAAAATATATGGATGAACACAAAAATAATCCTTTGAATATCAGCGCAAAAGCCAAATCAGAGCGATACGCAAAAATCGTTGCCGACAGTATAATTGCCGCCGATGGTGACAAATACGGAGCAAACACATACTTCTATGATGCTGCAAAGGGATTAATAGCAGCCCTGATTCTGATTATTGCCGAATACGGAAATGACAAAGAATGTCATATAGTGTCCGTGCTGAAACTGATGATAGAGTTGTTAGAAGCAAAACCACAGAAAAAGTCACAACTTAAATCGGAAACATACTTTGCTGATCTGATTAAATTGCTACCGCCGGAACATAAAGCAAGATGGTTATCAGGTGCGGCGATTAACAATGCAGATCAAGCAGCACTCTCGGTCATCTCTACTGCCCTGTCACGTTTAAATTCACTCATTGACACAGAAACCGAACAGATTTTATGCTTTAACACAGCAATCGATACTGAAACACTCTGTAAAGAAAAATGTGCTGTATTTATTGTACTTCCCGAAGAAGACAGAACAAAGTATGTAATTGCTAATCTGATTATAGAACAAATCAGCCGAGAAATATACCATATTGCCGATGAAAACGGCGGTCATTTAGATAAACGTATAATGATATATTTCGAGGAGTTTGGTACAATGCCGCCAATAAGCGGAGTTGAAGCAATGTTCTCCGCCCTGCGCTCACGTTCAGTGTCTATCGTTGCAATTATACAATCTTTCGCACAACTTGAAAAAAACTATGGAAAGCAAGGGGCTGAAATCATCGTTGATAACACACAACTAATGCTGTTTGGCGGTTTTGCTCCCGGTAGTTCTTCTGCCGAAAAGCTATCAAAAGACCTCGGGAAGCAGACTATTCTGACAGGTAGTATTTCTAAAGGCAACGGAGGCAAAAACAGCGGTCACCAATCTCAGCAATTACAGATGACGGGACGAGAATTAATTACAGCCGATGAGCTGAAGTGCTTGCCAAAAGGAACATTTATTTGTACTAAAACAGGAATGTCGCCGTTCAAAGTGCAGCTTCTGTTTTATGAAAAACTTGGCATACGCTACGATGAAAAGCTGAACGCTGAGATTAAAGAGGTTAAAACAGTATATTATGCTGATCGAAAATCGATTAGCAAAGTAATTAAAAAACAGCATATCGATGAGCAGGAGAATGAAATGAATAAAGAAGAAAATGTAAGCGATATTAACGAGCTTATAACCGATTACTCGCTTGAAGAAGATGATATTTTCACAGAAACTCCTTCAAGCAAAAAAATGATACGAACATAA
PROTEIN sequence
Length: 607
MQQYVFIVIIAIVFLAMIIFAVIGKNYSLDKIKARKVGNGQHGTAHWAEHKEISQNFSILKYEPQLWRMGACRPTIDGTIVGFEKKGKDTYALIDTSDVHTLMIAAAGTGKTTFFLEPNIEYCCAAGMSFISTDTKGDIYRNCGYVAAKRYGYKISVIDLRNPLKSDGFNLLHLVKKYMDEHKNNPLNISAKAKSERYAKIVADSIIAADGDKYGANTYFYDAAKGLIAALILIIAEYGNDKECHIVSVLKLMIELLEAKPQKKSQLKSETYFADLIKLLPPEHKARWLSGAAINNADQAALSVISTALSRLNSLIDTETEQILCFNTAIDTETLCKEKCAVFIVLPEEDRTKYVIANLIIEQISREIYHIADENGGHLDKRIMIYFEEFGTMPPISGVEAMFSALRSRSVSIVAIIQSFAQLEKNYGKQGAEIIVDNTQLMLFGGFAPGSSSAEKLSKDLGKQTILTGSISKGNGGKNSGHQSQQLQMTGRELITADELKCLPKGTFICTKTGMSPFKVQLLFYEKLGIRYDEKLNAEIKEVKTVYYADRKSISKVIKKQHIDEQENEMNKEENVSDINELITDYSLEEDDIFTETPSSKKMIRT*