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L2_047_000M1_scaffold_11319_2

Organism: dasL2_047_000M1_concoct_51_fa

partial RP 36 / 55 BSCG 35 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: 82..2823

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 914.0
  • Bit_score: 1790
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCZ6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 914.0
  • Bit_score: 1790
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 931.0
  • Bit_score: 792
  • Evalue 1.30e-226

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Taxonomy

Clostridium sp. CAG:226 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2742
ATGCTGAACAGAAAGGCGAAACGAAGGATGAATGAGCATCCGCTGATAAAAATACTTAATAAGCACCCGGAGTATACACGCCTTGTTGACGCGCTGAAAAAGGGCGAGGGCAGCGCAGCCGTGTTCGGGCTGGGCGAGGCCGTGCGTCCGCACATTGCGGCGGGCCTGTTTTGCCATACGGGCAAAACCGTGCTGATAATAACCGCCAATGAATCAAGCGCCGCAAGGATACAGCAGGACATGGCCGCGTTTACGGACAGGGCGTATCATCTGCCCGCGCGGGAGTTGCCGCTGGGCGCAAAGGGCATTGCCGCCTCCGCCGGACTTACCGCAAGGCGGCTTGAGCCGCTGTGCGCGCTGCTTAACGGGGAAAACATTGCCGTTGCGGTATCTGCAGAGGCGCTGATACAGCGCATGACCCCGCCCGCAGCCATCGCCCAATGCATGCGCACCGTTTCCGCAGGGGACAGGACTGAGCCGCGCGAGCTTTTGGCCGCGCTTATAAACGCGGGGTACGAGCGGGTTGATATGTGCGAAGGCAAGGGGCAGGTGTGCCTGAGGGGCGGTTACTTGGACGTGTTCCCCATAAGCATGGCGAACCCAGTAAGGATAGAGTTCTTTGATGACGAGATAGACACCATGCGCACATACGACGCAGTATCTCAGCGCTCGATAGAGAACATAGACCGCTGCGTCATCCCCCCGGCAACGGAGATGCCCCTTACGAAGGAAGCACGCACGCGCGGCATGCGTGCGCTGCGCAAAACGGAGGGCATGAAGGAAGAATACGACCGGCTTTCCGAAGGCGGCGTACCACTCGGGCTTGAAATGCTGATGCCCCTGTTTTATCCGGAGGCGTTTATTACCGATTATCTGCCAGAGGGCGCGATAATATTGATAGACGAGCCGCAGCGCGTTGAGGAAAGCGCAAAGCTTGCCTTCACAACGCATCTTGACAGGGTTGGGTCATATATCCATGAAGGCACGGCGCTGCCCGAGCAGGCGGAGCTTATATGCCAGCCCTCGCACATATTGCAGAGCCTTGACACGCCATATACGGCCATGCTTTTCGCCATTACGCGGACATACGGGCTGATAAAGCCCAAATGCCTTTTCCGCTTTGAAACGCGGCCGATGGCGAAATACATAGGCAACACGCCAGCCCTTGCCGCGGACATTGAAAGCTGGAAGCGGGGCGGCAGCACCGTTATGATATACGCGGGCGCGCACGCAAAGCGCATAGGCGATATGCTGGGCGATGAAGGCGTTACTATAGGCATTGCCGAAGCCCTTACGCGGGACATCATAAGCGGGGAGCAGCTTATAGTGGGCCAGAGCATAGCGCGCGGCTTTGAATACCCCGAAATAAAGCTTGCGGTGATAAGCGAATGCGAGCTATACGGCACGGAATCGCGCCGCAGTGCGTCATCCTCCAAAAAGAAGCCCAAATTGGCCTTCAGCGAGCTTAGCGTGGGCGATTTGGTCGTGCATGAGCTGCACGGCATAGGCCGCTTCGTGGGCGTTGTAACGCTTCAGGTGGCGGGCGTATCGCGGGACTATCTGCACCTTGTTTACGCGGGCGGGGATAAACTTTACGTGCCTACGGATCAGCTTGACCGCGTGCAGAAATACATTGGCGGGGACGAAACCACCGCCCATCTTTCCCACCTTGGCACGGGGGAATGGCAGCGCACGGTAAACAAAACGCGGGAAAGCGTTAAAAAGCTGGCGTTCGATTTGGTAAAGCTTTACGGCGACAGGCTGCACAGGAAGGGCCATGCCTTCCCGCCTGACACGGCGTGGCAGAAGCGGCTGGAGGAAAGCTTCCCCTATCAGGAAACGCCGGATCAGCTTACGAGCATTGCCGAAATAAAGAAGGACATGGAAAGCGACCGCGTTATGGATAGGCTGCTTTGCGGGGACGTGGGCTACGGAAAGACGGAGGTCGCCCTCCGCGCCGCGTTCAAGGCCGTGACGGACAGCAAGCAGGTTGCCTTCCTTGTGCCAACGACAATACTTGCGCAGCAGCATTATAACACCCTTGCCGCCCGCTTTTCGGGCTTCCCCGTTAACGTTGCGCTGCTTTCGCGGTTCAATACCCCTTCGGAGGAGGCACGGGTGATAGACGGGCTTAAAAAAGGCACGATAGACGTTGTTGTCGGCACGCACAAGCTGCTTTCAAAATCCGTGCGGTTCAAGGACCTTGGCCTTCTTATAATAGACGAGGAGCAGCGCTTCGGCGTGGGCCACAAGGAGCAGATAAAGGAAATGCGCAAGGATATAGACGCGCTCACCCTTTCCGCAACGCCTATACCGAGAACGCTTCATATGTCCATGACGGGCATACGCGATATGTCAGTCATCGAAACCCCGCCGGAGCAGCGCTACCCCGTGCAGACATACGTTATGGAATACAGCGAGGCTGTTGCGCGGGAGGCCATAATGAAAGAGCTCGGCCGCGGGGGGCAGGTGTTCTTCGTTTACAATAACGTGCGCGGCATGGAAACGTTTGCGGAAAAGCTGAAGCAGCTTGTACCGGAGGCGCGCATAGCCTATGCCCACGGGCAGATGGGCGAACGGCAGCTTGAGCGCACGATGCTGGACTTTATGGAGCAGCAATACGACGTTCTGCTTTGCTCCACAATAATAGAAAGCGGGCTTGATATACCCAACGTAAACACCATTATAATATACGATGCGGACAAAATGGGCCTTGCCCAGCTTTATCAGCTGCGCGGCAGG
PROTEIN sequence
Length: 914
MLNRKAKRRMNEHPLIKILNKHPEYTRLVDALKKGEGSAAVFGLGEAVRPHIAAGLFCHTGKTVLIITANESSAARIQQDMAAFTDRAYHLPARELPLGAKGIAASAGLTARRLEPLCALLNGENIAVAVSAEALIQRMTPPAAIAQCMRTVSAGDRTEPRELLAALINAGYERVDMCEGKGQVCLRGGYLDVFPISMANPVRIEFFDDEIDTMRTYDAVSQRSIENIDRCVIPPATEMPLTKEARTRGMRALRKTEGMKEEYDRLSEGGVPLGLEMLMPLFYPEAFITDYLPEGAIILIDEPQRVEESAKLAFTTHLDRVGSYIHEGTALPEQAELICQPSHILQSLDTPYTAMLFAITRTYGLIKPKCLFRFETRPMAKYIGNTPALAADIESWKRGGSTVMIYAGAHAKRIGDMLGDEGVTIGIAEALTRDIISGEQLIVGQSIARGFEYPEIKLAVISECELYGTESRRSASSSKKKPKLAFSELSVGDLVVHELHGIGRFVGVVTLQVAGVSRDYLHLVYAGGDKLYVPTDQLDRVQKYIGGDETTAHLSHLGTGEWQRTVNKTRESVKKLAFDLVKLYGDRLHRKGHAFPPDTAWQKRLEESFPYQETPDQLTSIAEIKKDMESDRVMDRLLCGDVGYGKTEVALRAAFKAVTDSKQVAFLVPTTILAQQHYNTLAARFSGFPVNVALLSRFNTPSEEARVIDGLKKGTIDVVVGTHKLLSKSVRFKDLGLLIIDEEQRFGVGHKEQIKEMRKDIDALTLSATPIPRTLHMSMTGIRDMSVIETPPEQRYPVQTYVMEYSEAVAREAIMKELGRGGQVFFVYNNVRGMETFAEKLKQLVPEARIAYAHGQMGERQLERTMLDFMEQQYDVLLCSTIIESGLDIPNVNTIIIYDADKMGLAQLYQLRGR