ggKbase home page

L2_057_000M1_scaffold_5336_1

Organism: dasL2_057_000M1_concoct_41_fa

near complete RP 38 / 55 MC: 4 BSCG 41 / 51 MC: 7 ASCG 11 / 38
Location: comp(344..2332)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 662.0
  • Bit_score: 1335
  • Evalue 0.0
Isopropylmalate/homocitrate/citramalate synthases (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 661.0
  • Bit_score: 1256
  • Evalue 0.0
2-isopropylmalate synthase n=2 Tax=Ruminococcus lactaris RepID=B5CS19_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 662.0
  • Bit_score: 1335
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus lactaris → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1989
ATGGAAAACTGGAAAAAATACGAAAAGACTTATTTTATGCCGCCAGAGCCATGTTATGACTGGGTAAAAAAAGATTCTATTGATAAAGCACCGATCTGGTGCAGTGTGGATCTGCGGGATGGAAACCAGGCACTGATCGAACCAATGAGCCTGGATGAGAAACTGGAGTTTTTCCAGCTCCTCGTAGATGTTGGATTTAAAATGATCGAGGTAGGATTTCCTGCAGCATCTGAGACAGAGTATCAGTTTCTTAGAACATTGATCGAGCAGAATATGATTCCTGATGACGTTACGATTCAGGTTCTGACTCAGGCAAGAGAACATATCATCAAAAAAACTTTTGAAGCTGTAAAGGGTGCTCCACATGCGATCATCCATGTATACAATTCAACTTCTGTAGCACAGCGTGAACAGGTATTCCGCAAAGATAAAGAGCAGATTAAGCAGATTGCCATTGATGGAGCTACATTATTAAAGAAGCTTGCCGAGGAAACAGAAGGAAACTTCACTTTCCAGTACAGTCCGGAAAGTTTCCAGGGAACAGAAGTTGACTATGCATTGGATGTCTGCAACGCTGTCCTTGATATATGGCAGCCAACTGCTGACAACAAAGCGATCATCAATCTTCCTACAACGGTAGAAAATGCAATGCCGCATGTATTTGCCAGTCAGGTAGAGTATTTCAACAAACATTTATTACACCGCGAAAACGTAATCCTTTCCCTTCATCCACATAATGACAGAGGATCAGGTGTATCAGATGCAGAACTTGGAATCCTTGCCGGAGCAGATAAGATTGAGGGAACATTGTTTGGAAACGGTGAGAGAACCGGAAACGTAGATATCATTACTCTTGCCATGAACATGTTCTCACAGGGAGTAAATCCAAATCTTGATTTTTCCAATATGAGTGAGATCTGCGAAGTATATGAGCGTGTTACAAGAATGAAAGTTTCTCCTCGTCAGCCATATGCAGGTGACCTTGTATTTACTGCGTTCTCAGGTTCCCATCAGGATGCGATTGCAAAGGGCATGGCATGGAGAGAAGAACATGACTGCAAGACATGGACAGTTCCATATCTTCCGATTGACCCACAGGATGTTGGAAGAAGATATGATTCGGATGTTATCCGTATCAACAGCCAGTCAGGAAAAGGTGGCGTAAACTATATTCTGAAGCAGAGCTTTGGTATCAGCCTGCCGGAGAAGATGAGAGAAGAAGTCGGATACATGGTAAAAGATGTTTCTGACAAGGCTCATCAGGAACTGACACCGGATGTTGTATATCGTATTTTTGAGGATCATTATATCAGTGCAAAACCAATCTTCAGTGTGGACGAATGCCACTTTAAGCAGGAAGATGGTATCGTAGCAGAAGCAACGATCCATCAGAATGACAATAACCACAAGATCACAGGTGTTGGAAACGGACGCCTGGATGCAGTAAGCAATGCGATCAAGCATTACTTTGGCATCAGTTACGAACTTGCTTTTTATGAAGAACATTCTCTTACAAAAGGATCTTCTTCCCGTGCAGTTGCTTACGTTGGTGTTATCTGTAATAAAAAGAAATACTGGGGAGTCGGAATTGATGCCGACATTATTAAAGCATCCATCCAGGCTCTGGTAGTCGCCGTAAATAAATTGCCGGAAATTGCCGAATCCCAGTCCTGCAAAGATGAAAGACTTTTAGAAATCACCAACTACATCTACGCAAATTATAAAGATGTGACTTTGGATGACCTTTCAGAAAAGTTTTTCCTTTCCAAACCGTATCTCTCTAAATATATTAAAGAGAAATCCGGACTGACTTTCGGGGATATTCTTAAGCAGGTCAGAATGAAAAAGGCACGTGCAATGCTCAAGAGCAGCAGTGCTACTGTAGAAAGCATCGCAGAATCTGTCGGATATCAGAATGTAGAACATTTTAACCGGATCTTTAAGAAGATGTACAATATCACGCCGGTTCAGTATCGGAACAGACATTAA
PROTEIN sequence
Length: 663
MENWKKYEKTYFMPPEPCYDWVKKDSIDKAPIWCSVDLRDGNQALIEPMSLDEKLEFFQLLVDVGFKMIEVGFPAASETEYQFLRTLIEQNMIPDDVTIQVLTQAREHIIKKTFEAVKGAPHAIIHVYNSTSVAQREQVFRKDKEQIKQIAIDGATLLKKLAEETEGNFTFQYSPESFQGTEVDYALDVCNAVLDIWQPTADNKAIINLPTTVENAMPHVFASQVEYFNKHLLHRENVILSLHPHNDRGSGVSDAELGILAGADKIEGTLFGNGERTGNVDIITLAMNMFSQGVNPNLDFSNMSEICEVYERVTRMKVSPRQPYAGDLVFTAFSGSHQDAIAKGMAWREEHDCKTWTVPYLPIDPQDVGRRYDSDVIRINSQSGKGGVNYILKQSFGISLPEKMREEVGYMVKDVSDKAHQELTPDVVYRIFEDHYISAKPIFSVDECHFKQEDGIVAEATIHQNDNNHKITGVGNGRLDAVSNAIKHYFGISYELAFYEEHSLTKGSSSRAVAYVGVICNKKKYWGVGIDADIIKASIQALVVAVNKLPEIAESQSCKDERLLEITNYIYANYKDVTLDDLSEKFFLSKPYLSKYIKEKSGLTFGDILKQVRMKKARAMLKSSSATVESIAESVGYQNVEHFNRIFKKMYNITPVQYRNRH*