ggKbase home page

L2_057_014G1_scaffold_95_1

Organism: dasL2_057_014G1_concoct_14_fa

near complete RP 45 / 55 MC: 4 BSCG 48 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: comp(1..534)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=3 Tax=Veillonella atypica RepID=E1L5B3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 178.0
  • Bit_score: 339
  • Evalue 2.10e-90
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 178.0
  • Bit_score: 339
  • Evalue 2.90e-90
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 179.0
  • Bit_score: 278
  • Evalue 9.30e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Veillonella atypica → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 534
GTGGCTAAGAAAGTACAAAAAAGTCAAACAGAGGAGATTGTAGCACAACTTCTTGAAAAAGGCCGTAAAAGCGGTGTGTTGACACAATCAGAAATTTCAGATGCTCTTCATGAGCAAAGTGAGTTAACAGCAGAACAATTAGATGATATTTATGTTACTTTCAATAAACTAAATATCGAAGTTGTTCCAGATGTTGAGGACGATGATAAAGACGATGCCCTTGAACCTGATGATGATGTCGATAATGACCGTGATGCTGCGTCTGAAAAAAATATTTCCATTGACCTAAGCGTAGATGCTAGTGTTAATATCGACGATCCAGTTCGTATGTATTTGAAAGAAATTGGTCGTGTTCCATTGCTTTCAGCTGACGAAGAAATCGTATTAGCAAAACAAATTGAAGCAGGGGCAGAGGAAGATGCTACATATAAAGAAATTCAACTTAGCAAAAAGGCTAAGAAGAAATTGGTAGATGCTAACTTGCGCCTTGTTGTAAGTATTGCTAAACGTTATGTTGGCAGAGGCATGTTGTTC
PROTEIN sequence
Length: 178
VAKKVQKSQTEEIVAQLLEKGRKSGVLTQSEISDALHEQSELTAEQLDDIYVTFNKLNIEVVPDVEDDDKDDALEPDDDVDNDRDAASEKNISIDLSVDASVNIDDPVRMYLKEIGRVPLLSADEEIVLAKQIEAGAEEDATYKEIQLSKKAKKKLVDANLRLVVSIAKRYVGRGMLF