ggKbase home page

L2_059_000G1_scaffold_3892_6

Organism: dasL2_059_000G1_maxbin2_maxbin_082_fasta_fa

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38
Location: comp(9099..11366)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 755.0
  • Bit_score: 1497
  • Evalue 0.0
Ribonuclease R n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZE7_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 755.0
  • Bit_score: 1497
  • Evalue 0.0
rnr; exoribonuclease R similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 762.0
  • Bit_score: 761
  • Evalue 1.20e-217

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] spiroforme → Erysipelatoclostridium → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2268
ATGGAAGACGAAATATTATCGTTGTTAAGTGATGATAATTTTTTAGAACGTTCAATCGATTTATTAGCAAAAAAATTGGAATGTACTTCTAGTGAAAAATTTATTCAATTAGTTAAGTTAATGAATAATTTAGAAGAAAGTGGAAAAATAGTTAGAAATAAATACAATCATTACTATCTACCAAATCAATTTGGAATGATTTTAGGTACTTTAACAATCAATAAAAAGGGCTTTGGTTTTGTAGCGGTAGATGGCCAGGAAAAAGATATTTTTATTTCGCCTGATAATTTAAAAGATGCTTTTAATAAAGATGTTGTTTTAGTTGAAATCAATCCAATTGGTGATCCTGAAAAACCAGAGGGGAAAATACTTCGAGTTATTAAACGAGGTCAAACAAAATTAGTGGGTGAAATAAAAAAGGGTAGACGAGAATATTATGTTGAAGCTGATGATTCTAAGTTTAATAAATCTATTTATGTAGATCATGCTCATTTACATGGAGCAATTGTTGGTCATAAAGTTTTAGTTGAAATTAAAGTTTATAAGCCTGTTTTAAAAGGTAATGTAGAAAAGATTTTGGGGCATAAAAATGATCCGGGTGTTGATATTTTATCGATTGTGTATGATCATGATGCACCGGTAGAGTTTCCTAAAAACGTTTATGATCAAATTGAAAGTATACCAGATGCATTAGATGGAATTGATGTAAGTGATCGTGTTGATTTAAGAAATGAAGTCGTTGTTACTATTGATGGTGATGATGCTAAGGATTTGGATGATGGTATTTCATTAAAAAAACTAGTAAATGGTAATTATTATTTAGGGGTACATATAGCTGATGTGTCTTATTATGTAAAGGAAGGATCGCCATTAGATAAAGAGGCTTTTTTACGTGGAACATCAATATACTTGGCTGACCGTGTTATTCCGATGTTACCACATAAATTATCGAATAAAATATGTTCTTTAAACCCTAAGGTTGATCGTTTTACAATTTCATGTTTTATGGAAGTTAATCAAAAAGGTGAAGTTGTTGATCATGAAATTGTACCTGCTATAATTAATTCAACAGAAAGAATGACATATACTAATGTAAATAAGATATTAGATGGTGATCAAGCATTACAATTAGAGTATAGTCATGTAAAGGATATGTTCTTTTTAATGCAGGAATTAGCTTCAATTTTACAAGAAAGGAAAGCAAAGCGTGGAGCTATTGATTTTGATGTTAAAGAAGCAAAGGTAATTGTTAATAGCAAAGGTGAAACAGTAGATGTTGTTTTAAGAAATCGTGGGGCTAGTGATCGAATTATCGAAGAATTCATGTTATTGGCTAATGAAACAGTTGCAAAACACTTTAAATGGTTAGAATTACCATTTATATATCGTGTTCATGAGCAACCTAAAACAAAAAAATTAATGCAATTTAGTTCGATTGCTAAAGTTATGGGATATACGATCAAAGGTTCATTAGAACATATTTATCCTAATGAATTAAGTAGTATCATTGAAGCAAGTAAGGATACTCCTGAACATACGATTATTTCTACATTATTACTACGTTGTATGCAAAAAGCACGATATGATGAACAATGTCTAGGACATTTTGGTTTGGCTGATGAGTTCTATACACATTTTACTTCACCAATTAGACGTTACCCTGATTTGATTGTTCATCGATTAATTAGAAAATACTTATTTGAAAAATGTATAGATGACCAAACTATAAGACATTATCAGGAAATAATGCCAGAAATTGCCCTTCAAAGCTCAAATCGTGAACGTGAGGCAATTGATATTGAACGTGAAGTAGATGATATGAAAATTGCTGAATATATGGAAAAACATATTGGAGAGGAATTTGAAGGAATTATTAGTTCGATTACTAATTTTGGTTTTTTTGTAGAGTTGGATAATACTATTGATGGACTAGTTCATGTTAGTGATTTGGTCGATGATTTTTATTTTTTTGATGAAAAGAATCTTCGATATGTTGGTCAAAGAACAGGTAAAGTATTTAAAATGTCAGATCGAGTGAAAGTAAAAGTATCAAGTGCCTCTAAAGTTGATAAGGCAGTAGATTTTGAAATTGTTGGCATGAAATCCAACAAAAAGACAAGAAAAACTGTTATAATAAACACATATCATGATGATAAAAGAAAACATAAGAAATCAAGACATCAAAGAAGTCGCAGAGAATCACGATTTAATCATCATAATCAAAATGAAAGACGTAAATCAAAACGCGTAAAAAGTAAATATCGATAA
PROTEIN sequence
Length: 756
MEDEILSLLSDDNFLERSIDLLAKKLECTSSEKFIQLVKLMNNLEESGKIVRNKYNHYYLPNQFGMILGTLTINKKGFGFVAVDGQEKDIFISPDNLKDAFNKDVVLVEINPIGDPEKPEGKILRVIKRGQTKLVGEIKKGRREYYVEADDSKFNKSIYVDHAHLHGAIVGHKVLVEIKVYKPVLKGNVEKILGHKNDPGVDILSIVYDHDAPVEFPKNVYDQIESIPDALDGIDVSDRVDLRNEVVVTIDGDDAKDLDDGISLKKLVNGNYYLGVHIADVSYYVKEGSPLDKEAFLRGTSIYLADRVIPMLPHKLSNKICSLNPKVDRFTISCFMEVNQKGEVVDHEIVPAIINSTERMTYTNVNKILDGDQALQLEYSHVKDMFFLMQELASILQERKAKRGAIDFDVKEAKVIVNSKGETVDVVLRNRGASDRIIEEFMLLANETVAKHFKWLELPFIYRVHEQPKTKKLMQFSSIAKVMGYTIKGSLEHIYPNELSSIIEASKDTPEHTIISTLLLRCMQKARYDEQCLGHFGLADEFYTHFTSPIRRYPDLIVHRLIRKYLFEKCIDDQTIRHYQEIMPEIALQSSNREREAIDIEREVDDMKIAEYMEKHIGEEFEGIISSITNFGFFVELDNTIDGLVHVSDLVDDFYFFDEKNLRYVGQRTGKVFKMSDRVKVKVSSASKVDKAVDFEIVGMKSNKKTRKTVIINTYHDDKRKHKKSRHQRSRRESRFNHHNQNERRKSKRVKSKYR*