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L2_059_052G1_scaffold_107

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Displaying items 31-60 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_107_31
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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30840..31601
DNA (762bp) protein (254aa)
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:KEL79586.1}; EC=1.1.1.125 {ECO:0000313|EMBL:KEL79586.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase n=8 Tax=Citrobacter RepID=C1MB21_9ENTR
2-deoxy-D-gluconate 3-dehydrogenase
L2_059_052G1_scaffold_107_32
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31917..33335
DNA (1419bp) protein (473aa)
Arabinose-proton symporter n=5 Tax=Citrobacter RepID=C1MB20_9ENTR
Galactose-proton symporter {ECO:0000313|EMBL:KEL79588.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
arabinose:proton symporter
L2_059_052G1_scaffold_107_33
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33409..33735)
DNA (327bp) protein (109aa)
Cupin 2 domain-containing protein n=6 Tax=Citrobacter RepID=J0VJV9_9ENTR
Cupin {ECO:0000313|EMBL:KJC06937.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
cupin
L2_059_052G1_scaffold_107_34
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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33874..34584
DNA (711bp) protein (237aa)
Racemase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UM13_9ENTR
Racemase {ECO:0000313|EMBL:KJC06936.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
racemase
L2_059_052G1_scaffold_107_35
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34556..35491)
DNA (936bp) protein (312aa)
DNA-binding transcriptional regulator LysR n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QMS8_CITFR
Transcriptional regulator {ECO:0000313|EMBL:KJC12853.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulator
L2_059_052G1_scaffold_107_36
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35610..36866
DNA (1257bp) protein (419aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QTV5_CITFR
L2_059_052G1_scaffold_107_37
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36974..37984)
DNA (1011bp) protein (337aa)
Hth-type transcriptional regulator n=4 Tax=Citrobacter RepID=J0LYL3_9ENTR
Periplasmic binding s and sugar binding domain of LacI family protein {ECO:0000313|EMBL:KEL79594.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
LacI family transcriptional regulator
L2_059_052G1_scaffold_107_38
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37998..39026)
DNA (1029bp) protein (343aa)
HTH-type transcriptional regulator galR n=1 Tax=Citrobacter sp. KTE30 RepID=R8ULA5_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:KJC12815.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulator
L2_059_052G1_scaffold_107_39
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39624..41783
DNA (2160bp) protein (720aa)
Bifunctional protein Aas n=4 Tax=Citrobacter RepID=J1FWD4_9ENTR
Bifunctional protein Aas {ECO:0000256|HAMAP-Rule:MF_01162, ECO:0000256|SAAS:SAAS00010159}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
acyl-ACP synthetase
L2_059_052G1_scaffold_107_40
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41776..42969
DNA (1194bp) protein (398aa)
Lysophospholipid transporter LplT n=1 Tax=Citrobacter sp. KTE30 RepID=R8UM42_9ENTR
Lysophospholipid transporter LplT {ECO:0000256|HAMAP-Rule:MF_01585, ECO:0000256|SAAS:SAAS00010763}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
lysophospholipid transporter LplT
L2_059_052G1_scaffold_107_41
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43052..44092)
DNA (1041bp) protein (347aa)
Protein tas n=6 Tax=Citrobacter RepID=J1FW74_9ENTR
Oxidoreductase, aldo/keto reductase family {ECO:0000313|EMBL:CDL39235.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
tas; aldo/keto reductase
L2_059_052G1_scaffold_107_42
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44199..44417)
DNA (219bp) protein (73aa)
Uncharacterized protein n=18 Tax=Enterobacteriaceae RepID=C1MB10_9ENTR
ygdR; hypothetical protein
Lipoprotein {ECO:0000313|EMBL:ETX68395.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_059_052G1_scaffold_107_43
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44562..45275)
DNA (714bp) protein (238aa)
UPF0053 inner membrane protein ygdQ n=8 Tax=Citrobacter RepID=C1MB09_9ENTR
Inner membrane protein {ECO:0000313|EMBL:ETX62110.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
membrane protein
L2_059_052G1_scaffold_107_44
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45351..46046)
DNA (696bp) protein (232aa)
DNA mismatch repair protein MutH n=3 Tax=Citrobacter RepID=K8QMR8_CITFR
DNA mismatch repair protein MutH {ECO:0000256|HAMAP-Rule:MF_00759, ECO:0000256|SAAS:SAAS00057435}; Methyl-directed mismatch repair protein {ECO:0000256|HAMAP-Rule:MF_00759}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
DNA mismatch repair protein
L2_059_052G1_scaffold_107_45
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46731..47261
DNA (531bp) protein (177aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
RNA pyrophosphohydrolase (EC:3.6.1.-)
RNA pyrophosphohydrolase n=6 Tax=Citrobacter RepID=J0LSC7_9ENTR
L2_059_052G1_scaffold_107_46
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47274..49520
DNA (2247bp) protein (749aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:KEL79604.1}; EC=2.7.3.9 {ECO:0000313|EMBL:KEL79604.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Phosphoenolpyruvate-protein phosphotransferase n=6 Tax=Citrobacter RepID=J1FW68_9ENTR
phosphoenolpyruvate-protein phosphotransferase
L2_059_052G1_scaffold_107_47
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49709..50584
DNA (876bp) protein (292aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Prolipoprotein diacylglyceryl transferase n=5 Tax=Citrobacter RepID=J0LYK3_9ENTR
diacylglyceryl transferase
L2_059_052G1_scaffold_107_48
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50591..51385
DNA (795bp) protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
Thymidylate synthase n=10 Tax=Citrobacter RepID=C1MB04_9ENTR
thymidylate synthase
L2_059_052G1_scaffold_107_49
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51569..52039
DNA (471bp) protein (157aa)
Prepilin peptidase-dependent protein A n=5 Tax=Citrobacter RepID=J1FWC7_9ENTR
Prepilin peptidase dependent protein A {ECO:0000313|EMBL:ETX68388.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_059_052G1_scaffold_107_50
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52030..52593
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BE49_CITFR
Prepilin-type N-terminal cleavage/methylation domain protein {ECO:0000313|EMBL:KEL79608.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L2_059_052G1_scaffold_107_51
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52590..52997
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CX17_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC06919.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_052G1_scaffold_107_52
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52982..53305
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DLB6_CITFR
Prepilin peptidase-dependent protein C {ECO:0000313|EMBL:ETX68385.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_059_052G1_scaffold_107_53
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53318..56686
DNA (3369bp) protein (1123aa)
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
recC; exonuclease V subunit gamma (EC:3.1.11.5)
Exonuclease V subunit gamma n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DKA3_CITFR
L2_059_052G1_scaffold_107_54
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56866..59754
DNA (2889bp) protein (963aa)
Protease III n=4 Tax=Citrobacter RepID=J1FWC3_9ENTR
Protease 3 {ECO:0000313|EMBL:ETX68383.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
protease
L2_059_052G1_scaffold_107_55
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59747..63292
DNA (3546bp) protein (1182aa)
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
recB; exonuclease V subunit beta (EC:3.1.11.5)
Exonuclease V subunit beta n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BE53_CITFR
L2_059_052G1_scaffold_107_56
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63289..65118
DNA (1830bp) protein (610aa)
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
recD; exonuclease V subunit alpha (EC:3.1.11.5)
Exonuclease V subunit alpha n=3 Tax=Citrobacter RepID=K8QP75_CITFR
L2_059_052G1_scaffold_107_57
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65243..66574)
DNA (1332bp) protein (444aa)
Amino-acid acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01105}; EC=2.3.1.1 {ECO:0000256|HAMAP-Rule:MF_01105};; N-acetylglutamate synthase {ECO:0000256|HAMAP-Rule:MF_01105}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
N-acetylglutamate synthase (EC:2.3.1.1)
Amino-acid acetyltransferase n=7 Tax=Citrobacter RepID=G9S9M8_CITFR
L2_059_052G1_scaffold_107_58
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66809..68062
DNA (1254bp) protein (418aa)
N-acetylmuramoyl-L-alanine amidase n=2 Tax=Citrobacter RepID=K8QK88_CITFR
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:KJC12795.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
amiC; N-acetylmuramoyl-L-alanine amidase
L2_059_052G1_scaffold_107_59
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68436..69005
DNA (570bp) protein (190aa)
Fimbrial-like protein n=3 Tax=Citrobacter RepID=K8QMQ3_CITFR
Fimbrial protein {ECO:0000313|EMBL:KJC12794.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
L2_059_052G1_scaffold_107_60
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69067..69612
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8QTS2_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC12793.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Displaying items 31-60 of 106 in total

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