ggKbase home page

L2_059_052G1_scaffold_128

Search features with annotation key words

Displaying items 31-60 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_128_31
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29233..29913)
DNA (681bp) protein (227aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D65829 related cluster n=1 Tax=unknown RepID=UPI0003D65829
serine O-acetyltransferase
L2_059_052G1_scaffold_128_32
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30578..31180
DNA (603bp) protein (201aa)
UPI0003D5CCB7 related cluster n=1 Tax=unknown RepID=UPI0003D5CCB7
HDIG protein {ECO:0000313|EMBL:ETI86709.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
metal dependent phosphohydrolase
L2_059_052G1_scaffold_128_33
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(31177..31824)
DNA (648bp) protein (216aa)
UPI0003D5AF83 related cluster n=1 Tax=unknown RepID=UPI0003D5AF83
ComF family protein {ECO:0000313|EMBL:ETI86710.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ComF family protein
L2_059_052G1_scaffold_128_34
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(32031..32177)
DNA (147bp) protein (49aa)
UPI0003D5AF83 related cluster n=1 Tax=unknown RepID=UPI0003D5AF83
Uncharacterized protein {ECO:0000313|EMBL:ETI86711.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L2_059_052G1_scaffold_128_35
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(32303..32929)
DNA (627bp) protein (209aa)
UPI0003D6617C related cluster n=1 Tax=unknown RepID=UPI0003D6617C
Uncharacterized protein {ECO:0000313|EMBL:ETI86712.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L2_059_052G1_scaffold_128_36
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33260..35398)
DNA (2139bp) protein (713aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
helicase, RecD/TraA family (EC:3.1.11.5)
UPI0003D5DEE1 related cluster n=1 Tax=unknown RepID=UPI0003D5DEE1
L2_059_052G1_scaffold_128_37
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(35395..35652)
DNA (258bp) protein (86aa)
UPI0003D5D494 related cluster n=1 Tax=unknown RepID=UPI0003D5D494
Uncharacterized protein {ECO:0000313|EMBL:ETI86540.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
chorismate mutase
L2_059_052G1_scaffold_128_38
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(35727..36863)
DNA (1137bp) protein (379aa)
UPI0003D5E8D7 related cluster n=1 Tax=unknown RepID=UPI0003D5E8D7
Aminotransferase {ECO:0000313|EMBL:ETI86539.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
GntR family transcriptional regulator
L2_059_052G1_scaffold_128_39
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(36908..38008)
DNA (1101bp) protein (367aa)
UPI0003D62626 related cluster n=1 Tax=unknown RepID=UPI0003D62626
Glycerol dehydrogenase {ECO:0000313|EMBL:ETI86538.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
glycerol dehydrogenase-like oxidoreductase
L2_059_052G1_scaffold_128_40
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(38095..39030)
DNA (936bp) protein (312aa)
UPI0003D6079C related cluster n=1 Tax=unknown RepID=UPI0003D6079C
Riboflavin biosynthesis protein RibF {ECO:0000313|EMBL:ETI86537.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
riboflavin biosynthesis protein RibF
L2_059_052G1_scaffold_128_41
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(39027..39884)
DNA (858bp) protein (286aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D67FB2 related cluster n=1 Tax=unknown RepID=UPI0003D67FB2
tRNA pseudouridine synthase B
L2_059_052G1_scaffold_128_42
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(39868..40827)
DNA (960bp) protein (320aa)
UPI0003D656A5 related cluster n=1 Tax=unknown RepID=UPI0003D656A5
DHHA1 protein {ECO:0000313|EMBL:ETI86534.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
phosphoesterase RecJ domain-containing protein
L2_059_052G1_scaffold_128_43
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(40814..41203)
DNA (390bp) protein (130aa)
UPI0003D657B9 related cluster n=1 Tax=unknown RepID=UPI0003D657B9
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ribosome-binding factor A
L2_059_052G1_scaffold_128_44
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(41218..43809)
DNA (2592bp) protein (864aa)
UPI0003D5D91F related cluster n=1 Tax=unknown RepID=UPI0003D5D91F
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
translation initiation factor IF-2
L2_059_052G1_scaffold_128_45
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(43821..44132)
DNA (312bp) protein (104aa)
UPI0003D5EEA8 related cluster n=1 Tax=unknown RepID=UPI0003D5EEA8
Ribosomal protein L7Ae {ECO:0000313|EMBL:ETI86531.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ribosomal protein L7Ae/L30e/S12e/Gadd45
L2_059_052G1_scaffold_128_46
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(44129..44395)
DNA (267bp) protein (89aa)
UPI0003D5BC86 related cluster n=1 Tax=unknown RepID=UPI0003D5BC86
Uncharacterized protein {ECO:0000313|EMBL:ETI86530.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L2_059_052G1_scaffold_128_47
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44379..45545)
DNA (1167bp) protein (389aa)
UPI0003D694C7 related cluster n=1 Tax=unknown RepID=UPI0003D694C7
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
NusA antitermination factor
L2_059_052G1_scaffold_128_48
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(45559..46017)
DNA (459bp) protein (153aa)
UPI0003D6488C related cluster n=1 Tax=unknown RepID=UPI0003D6488C
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ribosome maturation factor rimP
L2_059_052G1_scaffold_128_49
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(46137..46796)
DNA (660bp) protein (220aa)
UPI0003D5D647 related cluster n=1 Tax=unknown RepID=UPI0003D5D647
Uncharacterized protein {ECO:0000313|EMBL:ETI86527.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L2_059_052G1_scaffold_128_50
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(46789..47355)
DNA (567bp) protein (189aa)
UPI0003D63F61 related cluster n=1 Tax=unknown RepID=UPI0003D63F61
Transglycosylase SLT protein {ECO:0000313|EMBL:ETI86526.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
Lytic transglycosylase catalytic
L2_059_052G1_scaffold_128_51
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(47348..47953)
DNA (606bp) protein (202aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
coaE; dephospho-CoA kinase (EC:2.7.1.24)
UPI0003D6140E related cluster n=1 Tax=unknown RepID=UPI0003D6140E
L2_059_052G1_scaffold_128_52
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(47956..48768)
DNA (813bp) protein (271aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020854}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.23 4.2.99.18)
UPI0003D60EAA related cluster n=1 Tax=unknown RepID=UPI0003D60EAA
L2_059_052G1_scaffold_128_53
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(48768..51362)
DNA (2595bp) protein (865aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D61FA6 related cluster n=1 Tax=unknown RepID=UPI0003D61FA6
DNA polymerase I
L2_059_052G1_scaffold_128_54
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

51518..52402
DNA (885bp) protein (295aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5C27C related cluster n=1 Tax=unknown RepID=UPI0003D5C27C
pseudouridine synthase, RluA family
L2_059_052G1_scaffold_128_55
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

52421..53350
DNA (930bp) protein (310aa)
fructose-1,6-bisphosphate aldolase, class II (EC:4.1.2.13)
UPI0003D63B53 related cluster n=1 Tax=unknown RepID=UPI0003D63B53
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:ETI86521.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L2_059_052G1_scaffold_128_56
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(53388..53954)
DNA (567bp) protein (189aa)
UPI0003D5E6D3 related cluster n=1 Tax=unknown RepID=UPI0003D5E6D3
DSBA oxidoreductase {ECO:0000313|EMBL:ETI86520.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
2-hydroxychromene-2-carboxylate isomerase
L2_059_052G1_scaffold_128_57
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

54038..54394
DNA (357bp) protein (119aa)
UPI0003D6183F related cluster n=1 Tax=unknown RepID=UPI0003D6183F
ArsC family protein {ECO:0000313|EMBL:ETI86519.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ArsC family protein
L2_059_052G1_scaffold_128_58
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

54404..54919
DNA (516bp) protein (172aa)
UPI0003D5D8FC related cluster n=1 Tax=unknown RepID=UPI0003D5D8FC
Nitroreductase {ECO:0000313|EMBL:ETI86518.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
nitroreductase
L2_059_052G1_scaffold_128_59
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(55149..57533)
DNA (2385bp) protein (795aa)
UPI0003D5A9AE related cluster n=1 Tax=unknown RepID=UPI0003D5A9AE
Ferrous iron transport protein B {ECO:0000313|EMBL:ETI86516.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ferrous iron transporter B
L2_059_052G1_scaffold_128_60
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(57520..57774)
DNA (255bp) protein (85aa)
UPI0003D68970 related cluster n=1 Tax=unknown RepID=UPI0003D68970
FeoA family protein {ECO:0000313|EMBL:ETI86515.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
FeoA family protein
Displaying items 31-60 of 73 in total

View Taxonomy