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L2_059_052G1_scaffold_138

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Displaying items 31-59 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_138_31
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(36856..38358)
DNA (1503bp) protein (501aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
sugar isomerase (EC:5.3.1.4)
L-arabinose isomerase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UZT9_9ENTR
L2_059_052G1_scaffold_138_32
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38369..40078)
DNA (1710bp) protein (570aa)
Ribulokinase {ECO:0000256|HAMAP-Rule:MF_00520, ECO:0000256|RuleBase:RU003455}; EC=2.7.1.16 {ECO:0000256|HAMAP-Rule:MF_00520, ECO:0000256|RuleBase:RU003455};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ribulokinase (EC:2.7.1.16)
Ribulokinase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UZ56_9ENTR
L2_059_052G1_scaffold_138_33
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40418..41263
DNA (846bp) protein (282aa)
Arabinose operon regulatory protein n=9 Tax=Citrobacter RepID=ARAC_CITFR
Arabinose operon regulatory protein {ECO:0000313|EMBL:CDL36306.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
transcriptional regulator
L2_059_052G1_scaffold_138_34
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41383..42150
DNA (768bp) protein (256aa)
Inner membrane protein n=3 Tax=Citrobacter RepID=K8QSW4_CITFR
Membrane protein {ECO:0000313|EMBL:KJC07562.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
L2_059_052G1_scaffold_138_35
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42195..42893)
DNA (699bp) protein (233aa)
Thiamine import ATP-binding protein ThiQ {ECO:0000256|HAMAP-Rule:MF_01723}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01723};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Thiamine transporter ATP-binding subunit n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R4X7_CITFR
thiQ; thiamine ABC transporter ATP-binding protein
L2_059_052G1_scaffold_138_36
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42877..44487)
DNA (1611bp) protein (537aa)
Thiamine transporter membrane protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QWA6_CITFR
Thiamine ABC transporter permease {ECO:0000313|EMBL:KJC13496.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
thiP; thiamine ABC transporter permease
L2_059_052G1_scaffold_138_37
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44463..45446)
DNA (984bp) protein (328aa)
Thiamine transporter substrate binding subunit n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R120_CITFR
Thiamine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC13495.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
tbpA; thiamine ABC transporter substrate-binding protein
L2_059_052G1_scaffold_138_38
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45634..47289)
DNA (1656bp) protein (552aa)
HTH-type transcriptional regulator sgrR n=3 Tax=Citrobacter RepID=J0VR84_9ENTR
Transcriptional regulator SgrR {ECO:0000313|EMBL:KJC13494.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulator SgrR
L2_059_052G1_scaffold_138_39
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47389..47517
DNA (129bp) protein (43aa)
3-isopropylmalate small subunit n=6 Tax=Citrobacter RepID=J1G2P4_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:CDL36314.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
L2_059_052G1_scaffold_138_40
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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47891..49069
DNA (1179bp) protein (393aa)
Sugar efflux transporter A n=2 Tax=Citrobacter RepID=C1MCI0_9ENTR
Putative transport protein {ECO:0000313|EMBL:CDL36315.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
sugar transporter
L2_059_052G1_scaffold_138_41
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49348..50112
DNA (765bp) protein (255aa)
Gluconate 5-dehydrogenase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UZV0_9ENTR
Short chain dehydrogenase family protein {ECO:0000313|EMBL:KEL79147.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
L2_059_052G1_scaffold_138_42
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50171..51454
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R126_CITFR
MFS transporter {ECO:0000313|EMBL:KJC07554.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
MFS transporter
L2_059_052G1_scaffold_138_43
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51516..52529
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8V0W2_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:KJC07858.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulator
L2_059_052G1_scaffold_138_44
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52575..53180)
DNA (606bp) protein (202aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
leuD; isopropylmalate isomerase (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QSX6_CITFR
L2_059_052G1_scaffold_138_45
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53191..54591)
DNA (1401bp) protein (467aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
isopropylmalate isomerase (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R4Z2_CITFR
L2_059_052G1_scaffold_138_46
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54594..55685)
DNA (1092bp) protein (364aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; 3-isopropylmalate dehydrogenase; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
3-isopropylmalate dehydrogenase n=2 Tax=Citrobacter RepID=K8QWB5_CITFR
3-isopropylmalate dehydrogenase
L2_059_052G1_scaffold_138_47
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55685..57256)
DNA (1572bp) protein (524aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
2-isopropylmalate synthase n=2 Tax=Citrobacter RepID=K8R131_CITFR
2-isopropylmalate synthase
L2_059_052G1_scaffold_138_48
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58088..59035
DNA (948bp) protein (316aa)
Leucine transcriptional activator n=3 Tax=Citrobacter RepID=K8QUS4_CITFR
Transcriptional regulator {ECO:0000313|EMBL:KJC07549.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
leuO; transcriptional regulator
L2_059_052G1_scaffold_138_49
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59354..61078
DNA (1725bp) protein (575aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
acetolactate synthase 3 catalytic subunit (EC:2.2.1.6)
Acetolactate synthase n=2 Tax=Citrobacter RepID=M3CZ68_CITFR
L2_059_052G1_scaffold_138_50
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61081..61572
DNA (492bp) protein (164aa)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:EFE07549.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EFE07549.1};; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
Uncharacterized protein n=10 Tax=Enterobacteriaceae RepID=A8ALM1_CITK8
ilvH; acetolactate synthase 3 regulatory subunit
L2_059_052G1_scaffold_138_51
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61753..62757
DNA (1005bp) protein (335aa)
DNA-binding transcriptional regulator FruR n=6 Tax=Citrobacter RepID=J1G2H0_9ENTR
Fructose repressor {ECO:0000313|EMBL:KEL79158.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
transcriptional regulator
L2_059_052G1_scaffold_138_52
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63371..63829
DNA (459bp) protein (153aa)
Protein MraZ n=8 Tax=Citrobacter RepID=C1MCJ2_9ENTR
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
cell division protein MraZ
L2_059_052G1_scaffold_138_53
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63831..64709
DNA (879bp) protein (293aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Ribosomal RNA small subunit methyltransferase H n=6 Tax=Citrobacter RepID=C1MCJ3_9ENTR
16S rRNA methyltransferase
L2_059_052G1_scaffold_138_54
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64706..65071
DNA (366bp) protein (122aa)
Cell division protein FtsL n=549 Tax=Enterobacteriaceae RepID=FTSL_SALTY
ftsL; cell division protein FtsL
Cell division protein FtsL {ECO:0000256|HAMAP-Rule:MF_00910}; TaxID=866913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736.;"
L2_059_052G1_scaffold_138_55
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65087..66343
DNA (1257bp) protein (419aa)
Peptidoglycan synthase ftsI n=7 Tax=Enterobacteriaceae RepID=I6HAW2_SHIFL
Peptidoglycan synthase ftsI {ECO:0000313|EMBL:ETX72152.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
cell division protein FtsI
L2_059_052G1_scaffold_138_56
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66340..66699
DNA (360bp) protein (120aa)
Peptidoglycan synthase ftsI n=2 Tax=Citrobacter RepID=R8VJE4_9ENTR
Peptidoglycan synthase ftsI {ECO:0000313|EMBL:ETX65775.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
cell division protein FtsI
L2_059_052G1_scaffold_138_57
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66686..68173
DNA (1488bp) protein (496aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=4 Tax=Citrobacter RepID=J1G2G6_9ENTR
L2_059_052G1_scaffold_138_58
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68170..69528
DNA (1359bp) protein (453aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UZ92_9ENTR
L2_059_052G1_scaffold_138_59
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69522..69602
DNA (81bp) protein (27aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Cedecea davisae DSM 4568 RepID=S3J823_9ENTR
Displaying items 31-59 of 59 in total

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