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L2_059_052G1_scaffold_118_27

Organism: L2_059_052G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(32575..36060)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 1161.0
  • Bit_score: 2273
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WGM0_EGGLE similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 1161.0
  • Bit_score: 2273
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 1161.0
  • Bit_score: 2273
  • Evalue 0.0

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3486
ATGCTCATCGATTCATTGACGTTCACCCTGGAGAAATCGGGCTGCCTCGACGCGTTCTGGGGCAAGCTGGACGCGGGCGAGGACGGCACGCTGGGCGTGGCCTCGTCGGCGCGTCCGTTCCTCGTGGCGGCGCGGTTCGCGCACAAGCCGCAGCCGACGCTCGTCGTGGTGGCGGGCGAGGACGCGGCCGTGGCGTTCTCGCGCAGCCTGGCGGCCTACCTGGGCGACGAGCGCGTCATGCGCTTTCCCGAGCGCAGCGACTACCCCTTCGTGCCGAAGCCCAGCGACCCTGCGCAGGTTGCACGGCGCATGGAGGCCGTGCACGCGCTGGCCAGCGGCCGCGAGGTCGTGGTGGTGGCCAGCGCCCGCGCGCTCGTGCGCGCGCTGCCGCCGGCGGGCTCCGACGTGCACGTGCCGGTGGCGCTTTCGACGGGCCGCGAGCTGGCGGCCATGCCCGGCGCTCAGGCGGCGAGCGTCACCGAGTTCGAGGACTTTGCCCATGCGCTGGAGGAGCGCGGCTACCGGAACACCGGCGAGCTGGACGGCCCCGGCACCTTCGCCGTGCGCGGCGGCACGATCGACGTGTTCCCCGGCAACCTCGTGTACCCGGTGCGGCTGGACTTCTTCGGCGACGAGCTGGAGGAGATCCGCCGCATCGTGCCCACCACCGGGCAGACCATCCAGGCGCTGCCGGACGTGAGCATCTACCCCGTGGTGGAGTTCTCGTGCTCCAAGCGGGGGCTCGCCCGCGCGCGCCAGAAGCTGGAGCGACCGGCCGCGACGAACCCCGTGCTGCGCGACGTGCTGGAGAAGTTGGACGGCGGCCTGCGCTTCGACGGTTCCGACATGCTGCTGCCGTACCTGTACGCGACCACGTCCACGTTGGGCGATTACGTGCGCCCCGGCGCGCTGAGCGTGCTTTTGGAGCCGCGCTCGCTGTTCGACGACATGAGCCACGCCTACGACGACGCGGCGGGACGCGCGAAGGGATCGAGCATCCCCGTGGACGGGCTGTACGCCGAGCCCGGGGCCGTGAGCTTTGGCGAGGGGCAGCGCGCAACCTACGTGTCCATCATGCGCGTGGGCGGGCACGTGGACGACGAGCTGCCGGTGAAGCGCGTGGAGGTGGCGGGGCATCCCGACAAGCTGTTCGGTCGGCTGCGCAGCCTCGTGGACACCGACTACACGGTGGTGTTCAGTGCGTCGAATTTCCGTGCGCGCCAGGACATGAAGCTGGCGTTCGTCGACCACGGTCTGCCGATCCAAGAGACGCTGGACGCGGAAGAGGACGCCGACGAACTGGAAGGTATCGCCAAGCGCCGTCTGCGGCGGGGCGTGGTGAACGTGGTGGACGTGGACGTCCCCCTGGGCATGATCATCCCGAAGGCGAAGCTGGCCATCGTCAGCCTGTCGGACACGCAGGGGGCGTCCACGTCGCGGCCGTCGCGCCACGTGGACATCACCGAGATCACCTTCCCGTACCAGCCGGGCGACTACGTGGTGCACGCCGCTCACGGCGTGGCCTACTTCAAGGAGCTGGTCCGCCGCGACGTGGACGGCACCGCGCGCGACTACCTGCTGCTGGAGTACTCCGAGGGCGACAAGCTGTACGTGCCGGTGGAGCAGCTCGACCGCGTGACGCGCTACGTGGGGCCGGAGGGCGCGAGCCCGCGCCTTACGCGCCTGAACACGGCCGATTGGTCGCGAGCGCTGGCCAAGGCGCGCAAGGCCACGAAGAAGCTGGCGTTCGACCTGGTGGACGTGTACGCGCGCCGCGCGTCCGTGCAAGGCTACCGCTTCGGGCCCGACACCGCGGCCCAACGCGAGATGGAGGAGGCGTTCCCCTACCAGGAGACGCCCGACCAGCTGGCCGCCATCGCGGACGTGAAGGCCGACATGCAGTCGGCGAAGCCCATGGACCGCCTCGTCTGCGGCGACGTGGGCTTCGGCAAGACCGAGGTGGCCCTGCGCGCCGCGTTCAAGGCGACGCAGGACTCCAAGCAGGTGATGGTGCTGTGCCCCACCACCATCCTCGCGCAGCAGCACTACACCAACTTCAAGGAGCGCTGCGAGCCGTTCGGCGTGCGCGTGGAGGTGCTCTCGCGCTTCCGCACGCCCGCGCAGCAGGCCGCCGCCCTCAAGGGCTTCCAGGAAGGTGACGTGGACGTGCTGGTGGGCACGCACCGTTTGCTGTCGCGCGATGTGAACCCGCACGACCTGGGGCTGGTCATCATCGACGAGGAGCAGCGCTTCGGCGTGGGCCACAAGGAGCAGATGAAGAACCTGCGCGAGTCCATCGACGTGCTCACGCTGTCGGCCACGCCCATCCCTCGCACCATGCAGATGTCGCTGTCGGGCGTGCGCGACATGAGCCTCATCCTCACGCCGCCCGACGAGCGCCGTCCCGTGGAAGTGCACGTGGGCGAGTGGGATCCCGACGTGGTGAGCGGCGCTATCAGGCGCGAGCTGGCGCGCGGCGGCCAGGTGTACTACGTGTCGAACCGCGTGCGCTCCATGGAGGAGGCGGTGCGGCGCGTCACCGCGGCCGCGGGCGAGGCGCGCGTGGGCGTGGCGCACGGGCAGATGTCGAAGGAGCAGCTGGAGCGCGTGATGGAGGACTTCAGCGCCGGCGAGCTGGACGTGCTGGTGGCCACCACCATCATCGAGAGCGGCATCGACAACCCGCACACGAACACGCTCATCATCGAGGACTCGCAGCGCTACGGATTGGCGCAGATGTACCAGCTGAAGGGCCGCGTGGGCCGTTCGTGCACGCAGGCGTACGCCTACTTCATGTTCCCCGAGCACATGGAGCTCACCGAGGAGGCGGCCGCGCGCCTGACCGCGCTGAACGAGCATACCGATCTCGGCAGCGGCATGCGCATCGCCATGCGTGACCTGGAGATCCGCGGCGCGGGCAGCCTGCTGGGCGCCGAGCAGTCGGGCAACATGTCCGCAGTGGGCTTCGACCTGTTCGCGCAGATGCTGAACCAGGCCGTGAGCGCCACGCGCGAAGGCGACCTCAAGGCCATGGACGCGCTGCCGCCCGCGCTCAGCGATATCACGGTGAACGTGCCGGGGCACACCTACCTGCCCGAAGAGTACGTGCCGGACGCCGACGAACGCGTGCTGTGGTATCGCAGGATAGCCTCGGCCGCCACCGAGCAGGCCGTGGAGGACGTGCGTGCCGACTTGGCCGACAAGCGCCCCGACATGCCGCAGGCGGCGAAGAACCTGTTGGAGAAGGCGCGCATCAAGGCCTACGCCAACGAGCACCATATCAAGACCGTGTCGGTGACGGCGGGCAAGCTGGTGGTGGAGCCCATCGACGTGCCCCGCGACAAGATGACGGGTCTGCGCCGTGCTGGCGGCCGCTACCTGGCCGACAAGCGCAAGCTGTCGCTGCCGCTGCGCTACTTCAAGCTGGACGAAGGCGACAACCTCCTGGCCCCCGTAGCCGAGTTCCTGGAGGAGCTGGCGAAATGA
PROTEIN sequence
Length: 1162
MLIDSLTFTLEKSGCLDAFWGKLDAGEDGTLGVASSARPFLVAARFAHKPQPTLVVVAGEDAAVAFSRSLAAYLGDERVMRFPERSDYPFVPKPSDPAQVARRMEAVHALASGREVVVVASARALVRALPPAGSDVHVPVALSTGRELAAMPGAQAASVTEFEDFAHALEERGYRNTGELDGPGTFAVRGGTIDVFPGNLVYPVRLDFFGDELEEIRRIVPTTGQTIQALPDVSIYPVVEFSCSKRGLARARQKLERPAATNPVLRDVLEKLDGGLRFDGSDMLLPYLYATTSTLGDYVRPGALSVLLEPRSLFDDMSHAYDDAAGRAKGSSIPVDGLYAEPGAVSFGEGQRATYVSIMRVGGHVDDELPVKRVEVAGHPDKLFGRLRSLVDTDYTVVFSASNFRARQDMKLAFVDHGLPIQETLDAEEDADELEGIAKRRLRRGVVNVVDVDVPLGMIIPKAKLAIVSLSDTQGASTSRPSRHVDITEITFPYQPGDYVVHAAHGVAYFKELVRRDVDGTARDYLLLEYSEGDKLYVPVEQLDRVTRYVGPEGASPRLTRLNTADWSRALAKARKATKKLAFDLVDVYARRASVQGYRFGPDTAAQREMEEAFPYQETPDQLAAIADVKADMQSAKPMDRLVCGDVGFGKTEVALRAAFKATQDSKQVMVLCPTTILAQQHYTNFKERCEPFGVRVEVLSRFRTPAQQAAALKGFQEGDVDVLVGTHRLLSRDVNPHDLGLVIIDEEQRFGVGHKEQMKNLRESIDVLTLSATPIPRTMQMSLSGVRDMSLILTPPDERRPVEVHVGEWDPDVVSGAIRRELARGGQVYYVSNRVRSMEEAVRRVTAAAGEARVGVAHGQMSKEQLERVMEDFSAGELDVLVATTIIESGIDNPHTNTLIIEDSQRYGLAQMYQLKGRVGRSCTQAYAYFMFPEHMELTEEAAARLTALNEHTDLGSGMRIAMRDLEIRGAGSLLGAEQSGNMSAVGFDLFAQMLNQAVSATREGDLKAMDALPPALSDITVNVPGHTYLPEEYVPDADERVLWYRRIASAATEQAVEDVRADLADKRPDMPQAAKNLLEKARIKAYANEHHIKTVSVTAGKLVVEPIDVPRDKMTGLRRAGGRYLADKRKLSLPLRYFKLDEGDNLLAPVAEFLEELAK*