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L3_063_040G1_scaffold_2509_1

Organism: L3_063_040G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: comp(2..1570)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 503.0
  • Bit_score: 991
  • Evalue 4.10e-286
Transcription-repair-coupling factor n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V007_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 503.0
  • Bit_score: 991
  • Evalue 2.90e-286
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 503.0
  • Bit_score: 989
  • Evalue 2.40e-286

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1569
ATGATTCAAAATTTTCCTGCATTTTATTATACCATGCTACTTAAGAAAAATGGATTTAGAACTTTAATACTTTCAGGAACAAGACCAAGGGGAGAAAGATTAGTAAACACTTTAAGAGAATTAGAGATAGAGAGTGTATATAAAGACGAAGTTGATGAAATAAATAATGGAGAAGTTGTAATAACCTTTGGAGAGCAGAATAAAGGATTTGAGTACCCAGATATAAAACTTTGTTTAATATCAGATAAGAGTGTTTTTGGTGAGGGTAAAAGAGCCAAAAAAGCTAAGAGAAAAAAATCAAAAGGTGTATCTAAAATTAAGAGTTTCGCTGAGTTAAAGCCAGGAGACTACGTAGTTCATGTAAATAGTGGTATAGGTGTCTATAAAGGAATAAAACAAATAGAAGTTCAAGGACATAAAAGAGATTATTTAGATATTGAATATTCAAAAGGTGATAAATTATATGTGCCAGTTGAACAATTAGATTTAGTTCAAAAATATATTGGATCAGATAGTGCTTCTCCTAAGATAAGTAAATTAGGAGGAAATGAGTGGCAAAAAGCTAAGGCTAAGGTAAGAAAATCCATAAATGACATAGCTGGTGACTTAGTAAAATTATATGCTGAGAGATCTACTGTAAAGGGATATAAATTCTCAAAGGATACTCAATGGCAAAAGCAATTTGAAGATGAATTTCCATATGAAGAAACACCAGACCAATTATCAGCTATTGAAGATATAAAGAGTGATATGGAAGCAAACAAAGTTATGGATAGATTACTTTGTGGTGATGTTGGATATGGAAAAACAGAGGTTGCCATTAGAGCCGCATTTAAGGCCGTAATGGAAGGAAAGCAAGTAGCATTTTTAGTTCCTACAACAATATTAGCAGAGCAACATTATAAGAATATGAAAAAAAGATTTGCAGGATTCCCTATAACTATTGATATGATAAGTAGATTTAGGACTAAGAAGCAACAAACAGAAACTTTAAAAGCTTTAAAAGAAGGAAATGTTGATATATTAATAGGAACTCATAGACTTGTTTCTAAAGATATTCAATTCAAGGATTTAGGGCTTCTTATTGTGGATGAAGAGCAAAGATTTGGAGTGGCTCAAAAAGAAAAGATTAAGAGTTTTAAGAAAAATGTTGATGTTCTTACTTTAAGTGCAACGCCAATACCTAGAACTCTTCATATGTCACTTACAGGGGTAAGGGATATTTCTGTAATAGAGACTCCACCAGAGAATAGATATCCTATTCAAACCTATGTTGTAGAACAAAATGATCAACTTATTAGAGATGCAATTTTAAGAGAAATTAATAGAGATGGTCAAGTTTATTTTGTTCATAATAGAGTTGAAAGTATTCAAGAGGTAGCTAATTATATACAGGAGCTTGTTCCAGAGTGTAAGGCAACTGTTATTCATGGACAAATGACAGAGAGACAGTTAGAAACTGAAATGATAGACTTTATGGAAAGAAAGTACGATGTTTTAGTATGTACTTCTATAATAGAAACAGGAATTGATATTTCAAATGTAAATACAACAGGGTTTAAATCTTCA
PROTEIN sequence
Length: 523
MIQNFPAFYYTMLLKKNGFRTLILSGTRPRGERLVNTLRELEIESVYKDEVDEINNGEVVITFGEQNKGFEYPDIKLCLISDKSVFGEGKRAKKAKRKKSKGVSKIKSFAELKPGDYVVHVNSGIGVYKGIKQIEVQGHKRDYLDIEYSKGDKLYVPVEQLDLVQKYIGSDSASPKISKLGGNEWQKAKAKVRKSINDIAGDLVKLYAERSTVKGYKFSKDTQWQKQFEDEFPYEETPDQLSAIEDIKSDMEANKVMDRLLCGDVGYGKTEVAIRAAFKAVMEGKQVAFLVPTTILAEQHYKNMKKRFAGFPITIDMISRFRTKKQQTETLKALKEGNVDILIGTHRLVSKDIQFKDLGLLIVDEEQRFGVAQKEKIKSFKKNVDVLTLSATPIPRTLHMSLTGVRDISVIETPPENRYPIQTYVVEQNDQLIRDAILREINRDGQVYFVHNRVESIQEVANYIQELVPECKATVIHGQMTERQLETEMIDFMERKYDVLVCTSIIETGIDISNVNTTGFKSS