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L3_063_040G1_scaffold_3142_2

Organism: L3_063_040G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: comp(1212..1346)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein CspD n=2 Tax=Clostridium bifermentans RepID=T4VMX8_CLOBI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 44.0
  • Bit_score: 89
  • Evalue 5.40e-16
Cold shock protein CspD {ECO:0000313|EMBL:EQK47129.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 44.0
  • Bit_score: 89
  • Evalue 7.50e-16
cspB; major cold-shock protein, RNA helicase co-factor, RNA co-chaperone similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 41.0
  • Bit_score: 75
  • Evalue 3.90e-12

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Taxonomy

[Clostridium] bifermentans → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 135
GATGACGTATTCGTACATTTCTCAGCTATACAAAGAGATGGATTCAAATCATTAGAAGAAGGTCAAGCAGTTAACTTTGAGATAGTTGAAGGAGCAAGAGGACCTCAAGCTGCTAACGTAACAATAGCAGAATAA
PROTEIN sequence
Length: 45
DDVFVHFSAIQRDGFKSLEEGQAVNFEIVEGARGPQAANVTIAE*