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L3_063_040G1_scaffold_1488_2

Organism: L3_063_040G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: 1732..2436

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, FliA/WhiG family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VYY5_CLOBI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 234.0
  • Bit_score: 450
  • Evalue 8.30e-124
RNA polymerase sigma factor {ECO:0000313|EMBL:KGJ50113.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 234.0
  • Bit_score: 450
  • Evalue 1.20e-123
RNA polymerase sigma-D factor similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 233.0
  • Bit_score: 224
  • Evalue 2.10e-56

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Taxonomy

Clostridium sp. NCR → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 705
ATGATTAGTAAAGAAGAACTTATAAATCAAAATATGCCTATTGTTAGAAGCATTGCTTCTAAGTATTATACAAATAAAATAGGAATGGAATACGAAGACTTAGTAAGTTATGGGGTTATGGGATTATTGGATGCAAGTGATAAGTTTGATGAAGGAAAAGGCGTTAAATTTTCAACTTATGCTTCTATAAGAATAACATCTTATATAATAGATGAAATTAGAAAACAATCACCAGTATCTAGAGGATGTATAAGTAAAGTAAGATCATATAAAAATTGTATAGAAAATTTACAACATAAAAATTTTAGAGAACCTACAGTAAATGAAATAGCTGACTTTATGGAAATATCAAATGACGAAGTTCATAAAATAAGAAAAAGCACTTTAAATTTAAGTACAAGTTCTCTTGATAATATGGTTTTAGATAGCGAAAATGATTTAAAGCTTATAGATATAATAAAAGACGAGTCTATAAACGTAGAAGCATCAATAGAAAAAGAAGAACTTATAGAAACAGTAGCTAAGGCGTTAGACTTGTTAAAGGAAAAAGATAGACTTGTGCTATCACTGTATTATTATGAAGAATTGACACTTAAAGAAATTGGCGAAATATTAGGAGTTACAGAGTCTAGAGTTTCACAGTTAAGTAAAAAGGCTATTTCAAATTTAAGAGGTATGATGAAAAAACTAAAATACCTGGATTAG
PROTEIN sequence
Length: 235
MISKEELINQNMPIVRSIASKYYTNKIGMEYEDLVSYGVMGLLDASDKFDEGKGVKFSTYASIRITSYIIDEIRKQSPVSRGCISKVRSYKNCIENLQHKNFREPTVNEIADFMEISNDEVHKIRKSTLNLSTSSLDNMVLDSENDLKLIDIIKDESINVEASIEKEELIETVAKALDLLKEKDRLVLSLYYYEELTLKEIGEILGVTESRVSQLSKKAISNLRGMMKKLKYLD*