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L3_068_000G1_public_UNK

In projects: L3_068_000G1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 438.21 Longest contig: 459.14 Kbp Bin length: 125.75 Mbp GC content: 45.93 %
Contigs count: 26781 Features count: 135941 rRNAs count: 14 tRNAs count: 1507

Genome completeness

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 18
Displaying items 26301-26350 of 26781 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_068_000G1_scaffold_4613
Species: [Clostridium] symbiosum (100%)
6 4918 bp 53.36 5.55 100.53
L3_068_000G1_scaffold_23641
Genus: Streptococcus (100%)
3 1131 bp 42.88 2.92 100.53
L3_068_000G1_scaffold_23643
Species: Veillonella sp. DORA_A_3_16_22 (50%)
2 1131 bp 48.89 8.49 100.53
L3_068_000G1_scaffold_13972
Species: Hungatella hathewayi (100%)
2 1871 bp 50.40 5.69 100.53
L3_068_000G1_scaffold_15679
Species: Peptoclostridium difficile (66.67%)
3 1683 bp 44.98 4.28 100.54
L3_068_000G1_scaffold_15707
Species: Corynebacterium pyruviciproducens (50%)
2 1680 bp 67.26 5.45 100.54
L3_068_000G1_scaffold_17799
Species: Propionibacterium sp. HGH0353 (100%)
2 1489 bp 62.86 3.93 100.54
L3_068_000G1_scaffold_10622
Species: Hungatella hathewayi (100%)
2 2405 bp 55.30 3.87 100.54
L3_068_000G1_scaffold_11730 3 2205 bp 69.71 3.13 100.54
L3_068_000G1_scaffold_14325
Species: Clostridiales bacterium 1_7_47FAA (100%)
2 1832 bp 51.36 6.06 100.55
L3_068_000G1_scaffold_20813
Species: Klebsiella oxytoca (100%)
2 1280 bp 61.25 54.84 100.55
L3_068_000G1_scaffold_20817
Species: Klebsiella oxytoca (100%)
2 1280 bp 60.55 128.55 100.55
L3_068_000G1_scaffold_4066
Species: [Clostridium] clostridioforme (100%)
6 5484 bp 35.21 7.03 100.55
L3_068_000G1_scaffold_24584
Species: Clostridium sp. ASBs410 (50%)
2 1089 bp 43.62 4.68 100.55
L3_068_000G1_scaffold_8503
Species: Hungatella hathewayi (100%)
3 2903 bp 50.67 4.39 100.55
L3_068_000G1_scaffold_16190
Species: Hungatella hathewayi (100%)
2 1632 bp 54.17 3.22 100.55
L3_068_000G1_scaffold_13085
Species: Anaerostipes caccae (50%)
2 1987 bp 50.63 6.27 100.55
L3_068_000G1_scaffold_21217
Species: Escherichia coli (100%)
2 1256 bp 51.83 29.86 100.56
L3_068_000G1_scaffold_24925
Species: [Clostridium] innocuum (50%)
2 1074 bp 49.53 4.75 100.56
L3_068_000G1_scaffold_25017
Species: Clostridium sp. MSTE9 (100%)
2 1071 bp 41.18 4.20 100.56
L3_068_000G1_scaffold_13322
Species: [Eubacterium] siraeum (66.67%)
3 1954 bp 45.24 4.15 100.56
L3_068_000G1_scaffold_16671
Species: Clostridium sp. 7_3_54FAA (50%)
2 1587 bp 49.65 4.82 100.57
L3_068_000G1_scaffold_18852
Species: Flavonifractor plautii (100%)
2 1408 bp 64.70 51.03 100.57
L3_068_000G1_scaffold_21656
Species: [Clostridium] saccharolyticum (50%)
2 1232 bp 42.86 6.94 100.57
L3_068_000G1_scaffold_21704
Species: [Clostridium] bifermentans (50%)
2 1229 bp 31.57 5.74 100.57
L3_068_000G1_scaffold_25486
Species: Peptoclostridium difficile (100%)
2 1050 bp 62.00 6.57 100.57
L3_068_000G1_scaffold_12398
Species: [Clostridium] symbiosum (50%)
2 2094 bp 50.86 4.66 100.57
L3_068_000G1_scaffold_15146
Species: Clostridium sp. SY8519 (50%)
2 1739 bp 45.14 3.02 100.57
L3_068_000G1_scaffold_8405
Species: Clostridium sp. ASBs410 (50%)
4 2935 bp 45.25 3.58 100.58
L3_068_000G1_scaffold_22243
Species: Escherichia coli (50%)
2 1199 bp 55.46 5.63 100.58
L3_068_000G1_scaffold_15405
Species: Streptococcus phage 2972 (50%)
2 1712 bp 40.30 3.15 100.58
L3_068_000G1_scaffold_19412
Order: Clostridiales (75%)
4 1369 bp 31.26 11.40 100.58
L3_068_000G1_scaffold_19448
Species: Clostridium sp. 7_3_54FAA (100%)
2 1366 bp 40.92 3.73 100.59
L3_068_000G1_scaffold_19451
Species: [Clostridium] celerecrescens (100%)
2 1366 bp 45.53 2.86 100.59
L3_068_000G1_scaffold_26169
Species: Roseburia sp. CAG:50 (50%)
2 1023 bp 48.39 3.23 100.59
L3_068_000G1_scaffold_26178
Species: Hungatella hathewayi (100%)
2 1023 bp 57.28 3.52 100.59
L3_068_000G1_scaffold_26249
Species: Clostridium sp. CAG:58 (50%)
2 1020 bp 50.39 3.82 100.59
L3_068_000G1_scaffold_14008
Species: Clostridium sp. ASBs410 (100%)
3 1867 bp 42.10 5.14 100.59
L3_068_000G1_scaffold_11740
Species: Eggerthella lenta (100%)
3 2204 bp 70.78 3.88 100.59
L3_068_000G1_scaffold_26314
Species: Prevotella timonensis (100%)
2 1017 bp 42.87 1.77 100.59
L3_068_000G1_scaffold_26318
Species: Escherichia coli (50%)
2 1017 bp 41.59 4.28 100.59
L3_068_000G1_scaffold_17423
Species: Slackia heliotrinireducens (50%)
2 1521 bp 70.02 2.96 100.59
L3_068_000G1_scaffold_26390
Species: Clostridiales bacterium 1_7_47FAA (100%)
2 1014 bp 58.38 3.99 100.59
L3_068_000G1_scaffold_19674
Order: Clostridiales (75%)
4 1351 bp 31.24 14.54 100.59
L3_068_000G1_scaffold_12870
Species: Bacteroides vulgatus (50%)
4 2019 bp 46.26 4.46 100.59
L3_068_000G1_scaffold_22718
Species: Desulfitobacterium dehalogenans (100%)
2 1175 bp 38.98 3.06 100.60
L3_068_000G1_scaffold_26621
Species: Veillonella dispar (100%)
2 1005 bp 41.19 4.63 100.60
L3_068_000G1_scaffold_14236
Species: Bacteroides vulgatus (100%)
2 1840 bp 42.72 5.05 100.60
L3_068_000G1_scaffold_22899
Species: [Clostridium] saccharolyticum (50%)
2 1166 bp 46.57 3.47 100.60
L3_068_000G1_scaffold_15886
Species: Clostridium sp. MSTE9 (100%)
2 1661 bp 43.23 3.25 100.60
Displaying items 26301-26350 of 26781 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.