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L3_069_000G1_scaffold_11156_2

Organism: dasL3_069_000G1_concoct_128_fa

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 1789..2304

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8S7_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 164.0
  • Bit_score: 319
  • Evalue 1.60e-84
Sigma-70 region 2 {ECO:0000313|EMBL:EEP44708.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 164.0
  • Bit_score: 319
  • Evalue 2.30e-84
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 159.0
  • Bit_score: 142
  • Evalue 7.70e-32

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Taxonomy

Collinsella intestinalis → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 516
GTGGCGCACGAAAGTCGCGGGATGGAACCCGCAGGAGTTAGGCGGCTCGTCGAGGCCCATTATTCCGACGTCTACGCGTACTGCCGCAGGCACACCGAGTCGGTCGACGAGGCGGAGGACGCCGTTCAGGAGGTGTTCCTCAGGTTCGTCGGCGCATCAGGGCGCTATCGGGACGACGGCAGGCCGCTGGCCTATCTGCTCACGATCGCGCGCAACGTCTGCGCCGACTCGCACCGCCGTGGCGCGATGCGCGCCGACGAGCTGCCCTGCGACGAGGTCCTCGCCGACCCGTCGCCCGGGTCCGGCTCGGCCGACAGGCTGTCCGCCGTTCGTCGCGCGGTCCGGGCCCTGCCAGACGAGGCCCGCGAGATCGTCGAGCTCAAGTTCGACCAGGGGCTCACCGCGGTGGAGATCGCGCGCGTCACTGGCCTCAGCCGCTTCGCGGTGGCGCGCCGGATCGGCTCCGCCCTGTCGGACATCAGGGAGGCCCTGGCCTCCGAGGAAGGGGACGCATGA
PROTEIN sequence
Length: 172
VAHESRGMEPAGVRRLVEAHYSDVYAYCRRHTESVDEAEDAVQEVFLRFVGASGRYRDDGRPLAYLLTIARNVCADSHRRGAMRADELPCDEVLADPSPGSGSADRLSAVRRAVRALPDEAREIVELKFDQGLTAVEIARVTGLSRFAVARRIGSALSDIREALASEEGDA*