ggKbase home page

L3_069_000M1_scaffold_502_5

Organism: L3_069_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 17
Location: comp(4062..5147)

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerC n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F5N2_CLOS4 similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 356.0
  • Bit_score: 291
  • Evalue 9.90e-76
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.9
  • Coverage: 356.0
  • Bit_score: 291
  • Evalue 1.40e-75
site-specific recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 346.0
  • Bit_score: 279
  • Evalue 1.10e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. ATCC 29733 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1086
ATGAAAAGTGAAACCGGATATGACGCCTATTTTGCAGGACAGCTCGACCTTGCCCCTATCGTTTTGAGGAAATACATAATTAACATGATTGCTATTGAAGGCAAGTCTATGGATACGGTTGTGAGTTATTTTGGCGATATTTTTTGGCTGTTTAGATATTTAGTTGCTTTAAAAGGTATTGAGATTACATATAAAGGTGATATTCTTTTACCGCATACACACGGAAATAATGACTACAACGAGATAATTAAGGCTGTATCTGATGTTATAGACACTGATTTCATTAGGAGTATCAGCCGTGATGATATTAAACAGTTTGTTATGTATATGGCAAGGCGAAAAGTTAAAGCCAGCACACGAAACAGAAGATTATCAGCAATAAGAAGCTTTTTTGAATTTTGTTGCAATGATGTTCAAATTATTGACTCCTCCCCTTGTCAAACTATTACCAATTCAAAAAAGGAAAAAAAGTTACCAAAGTACCTTACTCTTGAAGAATCAGAGAAACTCCTTGCAAGCGTTAAAGAAGGAAAAAATTATGACCGTAACTACTGCATGCTTACTCTGTTTCTTAATTGTGGTCTGCGTCTTACTGAACTTGTCGATATTGATATTTCGGACATCCAGAACAATACTCTTCGTATTATGGGTAAGGGTGCCAAGGAGCGTATCCTGCATTTGAATGAATCTTGCATGGTAGCACTTGAAAATTGGTTACAGGTAAGATTATCAAATAAGTATTTTGTAAAAGATAAAAATGCTCTTTTTATTTCGGCGAACGAAGGTACTAGATTATCTCGCCGTGCTGTACAGCTTGTAGTATCCGAAACGCTCAAAGCAGCCGGACTTGACGGCAAAGGGTATTCGACTCATAAGCTTAGACATACAGCTGCAACTCTGATGTATCAATACGGTGATGTGGATGTCTTAACACTCAAGGAAGTGTTAGGACACGAAGAATTAAGCACAACGCAAATCTATACGCATATTGATAACAAACAAGTGCGTGAAGCACTTGAAAAAAATCCCCTTGCACATAAAAATGTAGATTATATAGATGTTAACAATGATAAAAAAGGAGAATAA
PROTEIN sequence
Length: 362
MKSETGYDAYFAGQLDLAPIVLRKYIINMIAIEGKSMDTVVSYFGDIFWLFRYLVALKGIEITYKGDILLPHTHGNNDYNEIIKAVSDVIDTDFIRSISRDDIKQFVMYMARRKVKASTRNRRLSAIRSFFEFCCNDVQIIDSSPCQTITNSKKEKKLPKYLTLEESEKLLASVKEGKNYDRNYCMLTLFLNCGLRLTELVDIDISDIQNNTLRIMGKGAKERILHLNESCMVALENWLQVRLSNKYFVKDKNALFISANEGTRLSRRAVQLVVSETLKAAGLDGKGYSTHKLRHTAATLMYQYGDVDVLTLKEVLGHEELSTTQIYTHIDNKQVREALEKNPLAHKNVDYIDVNNDKKGE*