ggKbase home page

L3_069_000M1_scaffold_284_31

Organism: dasL3_069_000M1_concoct_2_fa

near complete RP 50 / 55 BSCG 50 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(36002..36934)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 310.0
  • Bit_score: 588
  • Evalue 3.60e-165
tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 312.0
  • Bit_score: 340
  • Evalue 3.50e-91
tRNA pseudouridine synthase B n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6U4_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 300.0
  • Bit_score: 571
  • Evalue 4.30e-160

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Collinsella sp. 4_8_47FAA → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 933
ATGGCTCGTCGAACGCCTTCTCATTTGAATATGCTACTCGCCGTCGATAAGCCGGTGGGCTGCACGTCCCATGACGTGGTTTCGCAATGCCGACGCGCCCTCCATGAGCGGCGCGTCGGCCATGCCGGCACGCTCGACCCCATGGCATCCGGCGTCATGGTGGTGGGCGTGGGCCAGGCTACTCGTCTGCTGGGCATGCTAACTCTCGATACCAAAAGCTATGTCGCCGACATCTCGTTTGGTGCCGAGACCAATACCGATGATGCGGAGGGCGAGGCGGTCCGCATAGTGGCTGTTGCCAACGAGCTCCGCGATCCTGCCTATGCCCGTGAGCACTTGGCCGCTATGTTGGGCCCGCAGATGCAGGTGCCGCCGGCGTTTTCGGCTATCTCGGTCAATGGCGTTCGCGCCTACAAGTCTGCTCGCGAGGGCAATGCGGTGGACCTACCTCCGCGTCCCGTCGAGGTCTATGCCGCCGACCTGATTGCCGTGGGCGGCGAGGGTGATACATGTGTGTGGACCGTGGCGTTCTCGGTGAGCAAGGGTACCTATATCCGTGCGCTCGCTCGCGACCTGGGCCGTGCTTGTGATAGCGCCGCGCATATTTCCGCGCTTCGTCGCACCGCATCCGGTGCTGTTTCCATTGGCGCTTGTCATGCGTTGGAGGAGCTTTCTCCCGAGTCCGTGGCTGGCTTTGCCCTGGATCCCATTGCAGCCCTGGGCGCCACGCGTGTTGACTTGCCGGGCAATCTTGCCGACGACCTGCTCTGCGGCCGTCGCATTCCCGTTGAGCGTGCGCTTGCCGATTTCGATGTCTCGAAGGCGCTGTTTGCGCTGGTGCTCGATGGGGGACTCAAGGCGCTCGCCCGCATTGAGAGTGGCCGCTTTGTTATGGAGCACGTGTTTCCGCAGGCAATCGGCGGTGTTCGATGA
PROTEIN sequence
Length: 311
MARRTPSHLNMLLAVDKPVGCTSHDVVSQCRRALHERRVGHAGTLDPMASGVMVVGVGQATRLLGMLTLDTKSYVADISFGAETNTDDAEGEAVRIVAVANELRDPAYAREHLAAMLGPQMQVPPAFSAISVNGVRAYKSAREGNAVDLPPRPVEVYAADLIAVGGEGDTCVWTVAFSVSKGTYIRALARDLGRACDSAAHISALRRTASGAVSIGACHALEELSPESVAGFALDPIAALGATRVDLPGNLADDLLCGRRIPVERALADFDVSKALFALVLDGGLKALARIESGRFVMEHVFPQAIGGVR*