ggKbase home page

L3_069_000M1_scaffold_1966_3

Organism: dasL3_069_000M1_concoct_2_fa

near complete RP 50 / 55 BSCG 50 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(2988..3203)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8I4_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 71.0
  • Bit_score: 136
  • Evalue 8.10e-30
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EBA40200.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 71.0
  • Bit_score: 136
  • Evalue 1.10e-29
Predicted transcriptional regulator with C-terminal CBS domains similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 70.0
  • Bit_score: 53
  • Evalue 1.50e-05

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Collinsella aerofaciens → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 216
ATGGACGAACGTGCGAAACAGATTCTTGGCAGGCGGGTCGAAGAGACACGCAGGGACCTTGGTATCTCCAAGGTTGATTTTTGTGTGGCGACAGGAATCAGCCGACCCTACCTCGACCGAATCGAAGATGGGACGGCAAATTTCACGCTCAAGGTTCTATTTAAGATCGCACCCGCACTCGGTATGACGGTGTCAGAGCTTCTTGAGGGTATCTAA
PROTEIN sequence
Length: 72
MDERAKQILGRRVEETRRDLGISKVDFCVATGISRPYLDRIEDGTANFTLKVLFKIAPALGMTVSELLEGI*