ggKbase home page

L3_072_000G1_scaffold_544_17

Organism: L3_072_000G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(19514..20143)

Top 3 Functional Annotations

Value Algorithm Source
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 209.0
  • Bit_score: 417
  • Evalue 5.70e-114
Endonuclease III n=1 Tax=Lactobacillus gasseri K7 RepID=S1SQ29_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 209.0
  • Bit_score: 421
  • Evalue 4.80e-115
endonuclease III similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 209.0
  • Bit_score: 417
  • Evalue 1.20e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lactobacillus gasseri → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 630
ATGGAAAAATTATTATCGGATGAAGAAGCTCGATTAGTTTTAAAAAGAATTTTATCTCTTTATCCGGATGCTAAAGGAGAGCTTCACTGGGATACAAAGTTTCATTTACTCTGTGCAGTTTTAATGAGTGCCCAAACTACTGATAAGATGGTTAATAAAACAACACCTAAATTTTTTAATGACTATCCTGACAGCGCCAGCTTAGCCCAAGCTAATATTAGAGATATCGAAGCACATATTCGCACCATTGGTTTGTATCGCACAAAGGCTAAGCATTTAAAGGAAACAGCACAGATCATTACAGACAAGTTCAATGGTGAAATTCCCCAGGATAAAAGGACTTTAATGACATTACCTGGCGTAGGAGAGAAAACAGCTAATGTTGTTTTAGCAGAAGGTTTTAAAATACCTGCAATTGCAGTTGATACTCATGTATCCCGTATTTCTAAAAGATTTAAGATAGTGGGGGAAAAAGCTACTCCCCACGAGGTAGAACAACGTCTTGAAGAATTACTCCCAAAAGAAGAATGGATTCGGACGCATCATGCAATGATTTTATTTGGTCGATATACAATGCCAGCTAGAACTAAAGATCAAGATCCGTATTCTTTTTTACCACCTTTAAAATGA
PROTEIN sequence
Length: 210
MEKLLSDEEARLVLKRILSLYPDAKGELHWDTKFHLLCAVLMSAQTTDKMVNKTTPKFFNDYPDSASLAQANIRDIEAHIRTIGLYRTKAKHLKETAQIITDKFNGEIPQDKRTLMTLPGVGEKTANVVLAEGFKIPAIAVDTHVSRISKRFKIVGEKATPHEVEQRLEELLPKEEWIRTHHAMILFGRYTMPARTKDQDPYSFLPPLK*