ggKbase home page

L3_072_000G1_scaffold_1180_30

Organism: L3_072_000G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 25868..26080

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix family protein n=19 Tax=Clostridium difficile RepID=T3B1Q4_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 139
  • Evalue 1.20e-30
Putative transcriptional regulator, XRE family protein {ECO:0000313|EMBL:EGO63532.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 67.0
  • Bit_score: 86
  • Evalue 1.30e-14
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 63.0
  • Bit_score: 80
  • Evalue 1.90e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acetonema longum → Acetonema → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 213
ATGTCTATAAAATTTTTTAAACTAATTGACTTACTAAACAGAAGAGGTATAACTAAAGAAGAACTAAGACTCAAAATAGGAGCTTCTTCTACTACAATAGCCAAACTATCTTCAAATAAAAATGTTTCACTTGATGTAATTGATAAAATATGTAAAGCTTTAAACTGCCAACCAGGTGATATTATGGAATATGAAGATGATGAAAAGTTATAA
PROTEIN sequence
Length: 71
MSIKFFKLIDLLNRRGITKEELRLKIGASSTTIAKLSSNKNVSLDVIDKICKALNCQPGDIMEYEDDEKL*