ggKbase home page

L3_072_000M1_scaffold_240_9

Organism: L3_072_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 20
Location: comp(9874..11817)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1262771 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1193.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 647.0
  • Bit_score: 1093
  • Evalue 0.0
topA; DNA topoisomerase 1 (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 655.0
  • Bit_score: 745
  • Evalue 7.50e-213
DNA topoisomerase 1 n=1 Tax=Clostridium sp. CAG:1193 RepID=R5IWS4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 647.0
  • Bit_score: 1093
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:1193 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1944
TTGAAAAATTTAGTAATAGTCGAATCACCAAGCAAATCAAGGACAATAGAAAAGTATTTGGGTAATGATTATAAAGTTTTGTCTAGTAAGGGACATATAAGAGATTTAGCAACAAAGGGGAAATATGGATTAGGTGTTGATATTGATAATCATTTTGCTCCAACTTATGAACTTATTAAGGGTAAAAAGAAAATGGTTAGTGAATTGAAAAAAGAAGTAAAAGCTGCTGATATGGTTTATCTTGCAACCGATCCCGATAGAGAGGGAGAGGCAATTAGTTGGCATTTGAAAGATGAGTTAAAGATTAAAGATTCTGATTATGAAAGAGTAGTGTTTAATGAAATAACAAAGGATACTGTTATAAAGGCATTTAGTAAGGCAAGAAAGATAGATGATGATTTGGTTCATAGTCAAGAAACGAGAAGAATATTAGATAGAATTATTGGTTTTAGGTTAAGTAAGTTAATGCAAGCCAAAACAGGTGGAAAGAGTGCTGGGAGAGTACAGAGTGTAGCACTTAAATTAATAGTGGATAGAGAAAGAGAAATCCAAAATTTTATTAAAGAAGAATATTGGACAATAGTGGCTAAATTTAATGATTTTGATGCATCTTTAGAAAAGTATAAAGATGATAAAGTGGAACTTCATAACGAAATCGAAGCGGATGATGTATTAAATAAGTTAGGTAATGTATTTAAAATAGAAAGTGTTGATAAGAAAGATAAGAAAAGGAGTTCAAAACCACCTTTTATAACTAGTACGTTAGAGCAAGAGGCAAGTATTAAACTAAATTTTACTTCTAAGAAAACTATGTCTTTAGCACAGAAATTATATGAGGGAATAGATTTAGAGGATGAAACAGTCGGTTTAATTACATATATGAGAACTGATTCTATTAGATTGAGTGATGAATATGTTAAATCAGCATATAAATATATAGAAACTAAGTATGGAAAAGAGTATTTGGGTATAGTAAAAAAGTCAAAGAAAACCGAAAATGTGCAAGATGCTCATGAAGCAATTAGACCTACTAGTGTAAATAGAACACCGGAATCAGTTAAGAAGTTTTTAACTCCTGATGAGTTTAAATTGTATTCAATGATATATAAAAGGGCTTTAGCGTCTTTGATGAAAGATGCTAAAAGTGAACAAACTACTGTAATACTTGATAATAATAATTATAAGTTTAAAACTACTGGTAGTGTAATTAAATTTGATGGATATTTAAAAGTATATGGAGATTATGAGGATAGTGAAGATGCGATAATTCCTCCTCTTGATACTTATAAATCTAATGTTTTAGTATCTAATGAAATAGATAAGGAACAACATTTTACTAAACCAAAACCAAGATATACGGAAGCAAAATTAATTAAGGAAATGGAAGAATTGGGTATTGGTAGACCATCAACATATTCTAAAACTATGGAAACAATAGTAGAAAGAGGTTATGTTAAAGTTGAAGAAAAGAAGTTTGTACCAACTGAAATAGGAATTGAAACAACAGATAAATTACAAGAATTTTTTAGTGATTTAATAAATGTAAAGTATACTGCTAAAATGGAGGATGATTTAGATAAAATAGCAGATGGAGATTTAGTGTGGTATAATTTACTTGATAAGTTTTATAAAGAATTTGAACCAATGGTAAAAGATGCATTTGATAATATGGAAAAGAAAAAAGAAGAGGAAACTGGTGAAATGTGTCCTTTATGTGGTAATCCATTAGTTGTTAGAAGTGGAAAATATGGAAAATTTGTTGCATGTAGTAATTATCCTAATTGTAAATATGTAAAGAAAAAAGAAAAACAGGTAGTTGAAATATGTAAGTGTCCGGAATGTGATGGAATGATAGTGGAAAAAACTACTAAAAAGGGTAAGGTATTTTACGGATGTAATAACTATCCTAAATGTAAATATGCTACGTGGAATAAGCCAGAATAG
PROTEIN sequence
Length: 648
LKNLVIVESPSKSRTIEKYLGNDYKVLSSKGHIRDLATKGKYGLGVDIDNHFAPTYELIKGKKKMVSELKKEVKAADMVYLATDPDREGEAISWHLKDELKIKDSDYERVVFNEITKDTVIKAFSKARKIDDDLVHSQETRRILDRIIGFRLSKLMQAKTGGKSAGRVQSVALKLIVDREREIQNFIKEEYWTIVAKFNDFDASLEKYKDDKVELHNEIEADDVLNKLGNVFKIESVDKKDKKRSSKPPFITSTLEQEASIKLNFTSKKTMSLAQKLYEGIDLEDETVGLITYMRTDSIRLSDEYVKSAYKYIETKYGKEYLGIVKKSKKTENVQDAHEAIRPTSVNRTPESVKKFLTPDEFKLYSMIYKRALASLMKDAKSEQTTVILDNNNYKFKTTGSVIKFDGYLKVYGDYEDSEDAIIPPLDTYKSNVLVSNEIDKEQHFTKPKPRYTEAKLIKEMEELGIGRPSTYSKTMETIVERGYVKVEEKKFVPTEIGIETTDKLQEFFSDLINVKYTAKMEDDLDKIADGDLVWYNLLDKFYKEFEPMVKDAFDNMEKKKEEETGEMCPLCGNPLVVRSGKYGKFVACSNYPNCKYVKKKEKQVVEICKCPECDGMIVEKTTKKGKVFYGCNNYPKCKYATWNKPE*