ggKbase home page

L3_072_000M1_scaffold_545_20

Organism: L3_072_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 20
Location: comp(19850..22069)

Top 3 Functional Annotations

Value Algorithm Source
exoribonuclease II (EC:3.1.13.1) similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 703.0
  • Bit_score: 585
  • Evalue 1.10e-164
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=212717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani (strain Massachusetts / E88).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 703.0
  • Bit_score: 585
  • Evalue 5.60e-164
Ribonuclease R n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q898Q8_CLOTE similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 703.0
  • Bit_score: 585
  • Evalue 4.00e-164

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium tetani → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2220
ATGGAAGAATTAGACAAATTAATCATAAATCAAATAAAACAAAACAAACTAAGTTCTCTTAGTTATGACCTTATAATAAACCAATTATCTGTGCTAAACAACAAACCTTATGAACTTATGAAATTGACATTAGATAGGCTTATTAGTGAAAACAAGGTAAGTCTTAAATGTGCCAAATGCGAAACTGCAAAACCGAAAAAAGAAAAACGAATTACAAAAATAGACAACTCGGTTAAATCGCCTTATTCATCTGATAGACAAAATAACATTGATTTGGCCTATGATATAATTGGCAGAAAAGACAAAAAATCTAATTCCAAGATTCAAAAGGTCGAAGGAAAAATTCAAGGCACATCTAAGGGCTATGCTTTTTTGATACCAACGGATATAACACTTGATGATATATTTATTCCTGAACGAGAATTGGGCAGTGCGATGAATAACGATAGAGTTGTTGTTGCTGTCAAAAATACTGGTGGCAAAAAAATGGAAGGCAAGGTTATTCAGGTTATTGAACGAAACAGCATGCGTATTGTTGGGCTTTTGCATATATTCAAAAAACTAGCATACGTTACTCCAGATGATGTTAAGTTTGGAAAAGATATATCCATTCCTTTGAAGAGTCTAAATGGAGCAAAAGACGGACAAAAAGTTGTAGCCAAAATTACTAGATATTATTCAAGCAAACGAAACCCTGATGGCGAAATTGTTGAAGTCTTGGGCGAGCCAAACAAGATAGATACTGAAGTTATGGCAATTATTAGAAGTTATGGACTCATCGAAGATTTTCCAAACAAAGTCAAAGAGAGTGCTAAGTTCTTGCCAGAGAGTATAAACAAAAGCGACTATCCCAATAGACTAGATTATACAAATAATATTTGCTTTACAATAGACGGTGAAGACACAAGAGATATTGATGATGCGGTGTCTATTGATATTGCAAAAAATGGCAATAGAATTTTGGGTGTACATATAGCAGACGTTGGAGAATATGTCAAAAGAGATAATGTGTTTGACAAGGAAGCATTCAAACGTGGAACTAGTGTATATTTTCCAAATCTTGTTTTGCCAATGCTTCCAAGAGAATTATCCAATGGAATTTGTTCACTAAACGAAAGAGTGGATAGACTAGCACTAAGTTGCTTTATGGAGTTTGATAAAAATGCAAACTTGGTTGATTATAAAATTTGTGAAAGTGTCATAAACTCCAAAAAGAGATTTACTTACACCGAAGTTCAAAGAGTGTTTGACGGAGCACATGACCAAAACGAAGAATTAATCGAAAAATTAAATCTTATGCGTTCGCTTGCTAGTCAACTAGAAAAGAAACGTCATGATAGGGGCGCTATTGAATTTAATATCCCCGAAGTTCAAGTATATTTAAATGATTTGGGTGATGTGTTGAATTTGACAAAACGTGAACATAACGAAAGTCATAAACTTATCGAATCGTTCATGATAGTGGCGAATGAGACAATTGCTACACACTTTCTGTCAAAAAATATACCATTTGTGTACAGAATACACGAAAGCCCTGATTCTGAAAAAATTCAAAGACTTGTTGGAATGGTTGATAATTTTGGAGTTAAGCATAGCATAAACACTCAAGAATGCGAGCCAAAAGACATTCAAAAGTTGCTTGAGAGTATAGAGAATGAGCCTTGTGAATATGTGCTAAATAAAATTGCTTTGCGTTGTATGAAAAAGGCAAAGTATAGTCCTGAATGCATTGGACACTTTGGTCTTGCGAGTCCAAAATATTGCCATTTCACAAGTCCGATTAGGCGTTATCCTGACCTTACTATTCATAGGATTATCAAAGAATATTTGCATAACGAAATTAATGATAGAGAAAAGTTAATTCTCAAAGAATTTGTCAACTACTCATCAATTCAATCGTCCGAAACAGAACGAAATGCTGAGAGTGTCGAAAGAGATGTTGATGATTTGTATAGAGTATTTTATATGACACATCACATTGGCGAAGAATTTGAAGGAGTGATTAGTGGTGTTACAAACTTTGGAATTTTTGTGGAACTAGAAAACACTTGTGAGGGCATGATAAAGATTGAAAATTTACCACAAGACCAATATGAATATTTTGAAGATAGATTCTGTCTCAAAGGTTATAATCACTTGTACACAATTGGCGACAAACTCAAAGTTAAGAGTGTAAGGGCAGATATACTTTCTCGTGAAATAGATTTTGAACTTGTATAA
PROTEIN sequence
Length: 740
MEELDKLIINQIKQNKLSSLSYDLIINQLSVLNNKPYELMKLTLDRLISENKVSLKCAKCETAKPKKEKRITKIDNSVKSPYSSDRQNNIDLAYDIIGRKDKKSNSKIQKVEGKIQGTSKGYAFLIPTDITLDDIFIPERELGSAMNNDRVVVAVKNTGGKKMEGKVIQVIERNSMRIVGLLHIFKKLAYVTPDDVKFGKDISIPLKSLNGAKDGQKVVAKITRYYSSKRNPDGEIVEVLGEPNKIDTEVMAIIRSYGLIEDFPNKVKESAKFLPESINKSDYPNRLDYTNNICFTIDGEDTRDIDDAVSIDIAKNGNRILGVHIADVGEYVKRDNVFDKEAFKRGTSVYFPNLVLPMLPRELSNGICSLNERVDRLALSCFMEFDKNANLVDYKICESVINSKKRFTYTEVQRVFDGAHDQNEELIEKLNLMRSLASQLEKKRHDRGAIEFNIPEVQVYLNDLGDVLNLTKREHNESHKLIESFMIVANETIATHFLSKNIPFVYRIHESPDSEKIQRLVGMVDNFGVKHSINTQECEPKDIQKLLESIENEPCEYVLNKIALRCMKKAKYSPECIGHFGLASPKYCHFTSPIRRYPDLTIHRIIKEYLHNEINDREKLILKEFVNYSSIQSSETERNAESVERDVDDLYRVFYMTHHIGEEFEGVISGVTNFGIFVELENTCEGMIKIENLPQDQYEYFEDRFCLKGYNHLYTIGDKLKVKSVRADILSREIDFELV*