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L3_072_000M1_scaffold_13973_4

Organism: L3_072_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 20
Location: comp(3579..4016)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DM44_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 141.0
  • Bit_score: 182
  • Evalue 2.00e-43
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 141.0
  • Bit_score: 182
  • Evalue 2.80e-43
RNA polymerase, sigma 27/28 subunit, RpsK/SigK similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 140.0
  • Bit_score: 171
  • Evalue 1.30e-40

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Taxonomy

Ruminococcus sp. CAG:563 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 438
ATGCTGGGAGCAATGGTACTGACGCTGCTGGGCGGGCTGTGGCTGCTGACGCTGCATGTTTCGACTTCAGGTTCATTCCCGCGGCCGCTGACGGCTAAGCAGGAGCGGGACTGCCTGGAGCGGATGAGCCGAGGAGACCGGGCGGCACGGAACGAGCTGGTGGAGCACAATCTGCGACTGGTGGCGCACATCGTGAAGAAGTACTACGCGGTGAGCGGGGAGCAGGATGATCTGATCTCGATAGGGACGATAGGGTTGATAAAGGCGGTGGAGACCTATAACTTGGAGAAGAAGACAAAATTCGCGACTTATGCTTCTAGGTGTATTGAGAATGAGATTCTGATGTATTTTAGGGCGCGAAGGAAGACGGCGGGGGATGTTTCATTGGAGGACCCGCTGGATACCGACCGGGGCAGACCACGAAACGGGGGCTGCTGA
PROTEIN sequence
Length: 146
MLGAMVLTLLGGLWLLTLHVSTSGSFPRPLTAKQERDCLERMSRGDRAARNELVEHNLRLVAHIVKKYYAVSGEQDDLISIGTIGLIKAVETYNLEKKTKFATYASRCIENEILMYFRARRKTAGDVSLEDPLDTDRGRPRNGGC*