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L3_072_000M1_scaffold_6396_1

Organism: dasL3_072_000M1_concoct_101_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(2..334)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L1F2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 110.0
  • Bit_score: 126
  • Evalue 1.30e-26
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 110.0
  • Bit_score: 126
  • Evalue 1.80e-26
RNA polymerase sigma-28 subunit SigE similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 114.0
  • Bit_score: 122
  • Evalue 5.30e-26

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Taxonomy

Ruminococcus sp. CAG:353 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 333
TTGAAAATTATCGAATTTTTAAAAGCATGGTTTCAAAAATTATTCGGGTGCGACGAAAACGTCGTAATGTACATTACGGGCGAGGGGAGTCTGCCCGAACCGCTTTGCGAAAGCGAAGAAAAAGACGCTCTTACCAAACTTAAAAGCGGAGATTCGGCTATACGCGAAAAACTGATAGTGCATAACTTGCGCCTTGTCGTTTACATAGCCAAGAAATTCGACAACACCGGACTTGATCAGGACGATCTTATATCGGTGGGGACGATAGGGCTCATAAAGGCTGTCGGTAGCTTCGATCCGGATAAAAACATTAAACTTGCCACTTATGCTTCT
PROTEIN sequence
Length: 111
LKIIEFLKAWFQKLFGCDENVVMYITGEGSLPEPLCESEEKDALTKLKSGDSAIREKLIVHNLRLVVYIAKKFDNTGLDQDDLISVGTIGLIKAVGSFDPDKNIKLATYAS