ggKbase home page

L3_072_000M1_scaffold_5696_9

Organism: dasL3_072_000M1_concoct_111_sub_fa

near complete RP 41 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 4927..5877

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 315.0
  • Bit_score: 411
  • Evalue 1.30e-112
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 315.0
  • Bit_score: 411
  • Evalue 6.20e-112
DNA-directed RNA polymerase subunit alpha n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M2E4_CLOCD similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 315.0
  • Bit_score: 411
  • Evalue 4.40e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] clariflavum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 951
ATGATGATAGAAATTGAAAAGCCCACGATTGAGTGCAGGCAGCTCAGTGATGACAATACCTATGCACAGTTCGTGGTGGAACCGCTGCAAAGAGGTTTCGGCCATACGCTTGGAAACTCTATGCGCAGGATTCTTATGTCATCGCTGCCCGGTGTTGCGGTAACTTCTATTCGCATCAACGGCGTGCTGCATGAGTTTACGGCGATTCCGGGTATCAGTGAGGATGTTGCGGAAATCATTCTCAACATCAAAGGAATTCATGCGAAGCTTCATTCCGACGGTCCTGTTACGGCGAATATCAACGCGAAAGGTCCCTGCACGGTTACGGCGGGCGATATTTTCGGGGACAGCAGCCTGGAAATTATCAATACGGATCATGTGATCGCAACGCTGAGCGAAAATGCTGTGCTCAATATGGAGCTTGTGTTTTCTAAAGGCATCGGTTATGTCAGCGCTGCAAACAATAAGTATGAGGAAATGCCGATTGATACGATCGCGGTGGATTCCATTTATACGCCGATCACTAAGGTTAATTATACTGTGGACAGCACAAGAATCGGCAGAGCGTCTGATTATGACAAGCTCACCATTGACGTGTGGACAAACGGAACGATTAACCCCAAGGAAGCAATTAGCCTTTCGGCAAAGATCCTTAGCGATTATATGGCGTTGTTTGTCAATTTGGCTGATAATGTCGGCGGATTGGAAATGATGGTGGAGAAGGAAGAGGAGAAGAAAACCAAGGTTCTGGAAATGACGATTGATGAACTGGATCTTTCCGTGCGTTCCTATAACTGCCTGAAGCGTGCCGGTATCAATACGGTTGACGAGCTGATCCGCCGTGATGAGGTGGACATGATGAAGGTGAGAAACCTCGGCAAAAAATCTCTGGAGGAAGTGCGGCAGCGGCTTGCATCGCTCGGGCTTTCCCTGAATAAAAGCGACGAATAA
PROTEIN sequence
Length: 317
MMIEIEKPTIECRQLSDDNTYAQFVVEPLQRGFGHTLGNSMRRILMSSLPGVAVTSIRINGVLHEFTAIPGISEDVAEIILNIKGIHAKLHSDGPVTANINAKGPCTVTAGDIFGDSSLEIINTDHVIATLSENAVLNMELVFSKGIGYVSAANNKYEEMPIDTIAVDSIYTPITKVNYTVDSTRIGRASDYDKLTIDVWTNGTINPKEAISLSAKILSDYMALFVNLADNVGGLEMMVEKEEEKKTKVLEMTIDELDLSVRSYNCLKRAGINTVDELIRRDEVDMMKVRNLGKKSLEEVRQRLASLGLSLNKSDE*