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L3_072_000M1_scaffold_7286_5

Organism: dasL3_072_000M1_concoct_111_sub_fa

near complete RP 41 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(5183..6478)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 390.0
  • Bit_score: 524
  • Evalue 9.00e-146
Transcription termination factor Rho n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AH90_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 390.0
  • Bit_score: 524
  • Evalue 6.40e-146
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 397.0
  • Bit_score: 505
  • Evalue 8.70e-141

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Taxonomy

Clostridium sp. CAG:1024 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1296
GCTGTTGAAATTCGGCAGACTAAGCCGATTTCCGTAATGTCTGCTGCTCCGAGCAGACTTTCTGCGCAGCACGCTCAGGCGAGAAACGGGCGCAATTTGAATCCGGCGGCAAATGAACTGCTTCGCAACGGCGAGTGCGGGGATTGCTGCGGCATATTGGATATCAGACCTGAAGGCTTCGGTTTCTTGCGCTCCACACAGTTCCGGATCGAAATGGAAACCGATCAGCGCGATGTGTACGTTTCAGCAGCGCAGATTCGTCGATTCCATTTGCGTTCCGGCGATATGGTTCGAGGAAAGACCCGTCCTATCCGGGAGGGAGAAAAATACCGCGCGCTGCTGTTTGTCGGTGAAGTAAACGGGCAGTCGCCTGAAATTGCCGCTGCGCGCGTGCCGTTTGAGGATCTGATTCCGATCTATCCGCAGGAAAGACTGCGCTTGGAGGGAAAGAGCAATCAGCGTGATCTTGCCGTTCGGCTGATTGATCTGATCGCTCCGATCGGAAAGGGGCAGCGCGGTATGATCGTTGCGCCGCCTAAAGCGGGAAAAACGATCATGCTTAAAAAGCTGGCCAATGCCATCAGCGAAAATTATCCGGAAGCAGAGCTTATCGTGCTGCTGATCGACGAGCGTCCCGAGGAAGTAACGGATATGCAGCGTTCCATTAAAGGCGATGTGATCTATTCTACCTTTGATGAGCGTCCGGAAAATCATGCGAAGATCGCAGAGCTTGTTTTGGAACGTGCAAAGCGTTTGGTAGAACAGAAAAAAGATGTTGTGATCTTGCTGGATTCGCTTACACGCCTTGCGCGCGCATATAATTTGGTTACGCCGCCTACGGGCAGAACGCTTTCGGGCGGCCTTGATCCGGGAGCTTTGTATACGCCCAAACGCTTTTTCGGCGCCGCGCGCAACATTGAGAACGGCGGAAGCCTTACGATCATTGCCACCGCGCTTGTGGAGACGGGTTCCCGCATGGATGAAATTATTTTTGAAGAGTTTAAAGGAACGGGAAATATGGAGATTCGGCTTGACCGCCGGCTTCAGGAAAAGAGGATCTTTCCCGCAATCGACATTTCCAAGAGCAGTACGCGCCGTGAGGAGCTTTTAATGACTTCAGCGGAGCTGAACGGAATGTGGTCGATCCGTAAGCTGCTTTCGCGCACCAGCGAGGAAATGGCCACGGAACAGCTGCTTTCTCTGCTTTCAAAGGCGGAAACGAATGAAATCTTTTTGCAGAGATTGCAGAACTGGTTTGCCGCAGTGGAAAAAGAAGGCTTTCAGCTGGTAAAATAA
PROTEIN sequence
Length: 432
AVEIRQTKPISVMSAAPSRLSAQHAQARNGRNLNPAANELLRNGECGDCCGILDIRPEGFGFLRSTQFRIEMETDQRDVYVSAAQIRRFHLRSGDMVRGKTRPIREGEKYRALLFVGEVNGQSPEIAAARVPFEDLIPIYPQERLRLEGKSNQRDLAVRLIDLIAPIGKGQRGMIVAPPKAGKTIMLKKLANAISENYPEAELIVLLIDERPEEVTDMQRSIKGDVIYSTFDERPENHAKIAELVLERAKRLVEQKKDVVILLDSLTRLARAYNLVTPPTGRTLSGGLDPGALYTPKRFFGAARNIENGGSLTIIATALVETGSRMDEIIFEEFKGTGNMEIRLDRRLQEKRIFPAIDISKSSTRREELLMTSAELNGMWSIRKLLSRTSEEMATEQLLSLLSKAETNEIFLQRLQNWFAAVEKEGFQLVK*