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L3_072_000M1_scaffold_6387_4

Organism: dasL3_072_000M1_concoct_111_sub_fa

near complete RP 41 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 1921..2712

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70, region 4 n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DWR3_CLOS4 similarity UNIREF
DB: UNIREF100
  • Identity: 30.8
  • Coverage: 260.0
  • Bit_score: 117
  • Evalue 1.40e-23
Sigma-70, region 4 {ECO:0000313|EMBL:ERJ00964.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.8
  • Coverage: 260.0
  • Bit_score: 117
  • Evalue 2.00e-23
DNA-directed RNA polymerase specialized sigma subunit similarity KEGG
DB: KEGG
  • Identity: 30.2
  • Coverage: 255.0
  • Bit_score: 112
  • Evalue 1.70e-22

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Taxonomy

Clostridium sp. ATCC 29733 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 792
ATGTACGAGGATAACGAAACATTGGCATTTGAAGCGCAAAACGGTGATATGGAAGCCATGCACGCGCTGTATGCAAACGTTAAAAAGCGGATCTCTTTGAAGGCAAATAAATTTTTCGTTGAACATGCACGCCGTTGCGCACATGCAGGCGTAACGCGAGCAGACCTTGAGCAAGAAGGCTATTTCGCTTTTGTACAGGCAGTCAACGCATATGAGCCGGAATCGGAATACAAGTTTGCATCCTATCTGCACTATCCGTTGCTTACAGCGTTCTATGCGGTTTGTGGAATGAGAACGCGCCGGATGTATAATGAACCGCTGAACAATGCCGTAAGCCTTGACACGCCCATAGGCGACGGAGAGGATGGCTTAACACTTTATGACATAATCCCCGACGATACGACGTACACAGCAGAACAAGTTGCGGAAGATTATGACCGCGCCGTTATGCGCCAAGACATTGAGACGGCTATAGACAAGCTTCCTTATCATGCCGCCTATGTTATCAGACATAAGTATTTATATGGACAAACAGTGATGGAAATAGCAAAGCAAAGGGGCGTATCATGGCAAGCTGCATCATATTCGAGAATCAAAGGCATGACCGCGTTGCGGCAAAACGAACACTTGCGCCTCCGATACTTTGACGATGTTATTTCCCGCCACGCTTACAACGGGGGTGTTGGCAGCTTTAATCACACATGGACAAGCAGCACAGAGCGGGCGGCAATGAAGCTTGAGGAATGGGAAGCGGTCAAACAAACAGCGAACGAAGACGGTTACACGGAATAA
PROTEIN sequence
Length: 264
MYEDNETLAFEAQNGDMEAMHALYANVKKRISLKANKFFVEHARRCAHAGVTRADLEQEGYFAFVQAVNAYEPESEYKFASYLHYPLLTAFYAVCGMRTRRMYNEPLNNAVSLDTPIGDGEDGLTLYDIIPDDTTYTAEQVAEDYDRAVMRQDIETAIDKLPYHAAYVIRHKYLYGQTVMEIAKQRGVSWQAASYSRIKGMTALRQNEHLRLRYFDDVISRHAYNGGVGSFNHTWTSSTERAAMKLEEWEAVKQTANEDGYTE*