ggKbase home page

L3_072_000M1_scaffold_623_2

Organism: dasL3_072_000M1_concoct_112_sub_fa

near complete RP 44 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(507..920)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAL4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 134.0
  • Bit_score: 230
  • Evalue 7.90e-58
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG51614.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 134.0
  • Bit_score: 230
  • Evalue 1.10e-57
Helix-turn-helix. similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 135.0
  • Bit_score: 103
  • Evalue 4.10e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] asparagiforme → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 414
ATGACTTTTGCAGACAAATTGAAAAACCTTATGAAAGAGTTGGATTTGACACAATCCAAACTTTCAGACCTTACCGAGATCGGTAAATCCTCTATCAGTCAATACCTTTCCGGGAAGAACGAACCTTCCAAAGACCGCAAACAGGAAATTGCCCGTGCGTTGGGGGTTCAGGATAACTACTTTGAAATGTTTGAACCCGCTGCAACGGTTCAGCATGACGGGGTTGTGAATTTACCCGTTCCCCTTGCGGCAAAGCTGATGAAGAAATCCAAAGAATGGGTTATGCAGGGTTTAAGGGATGGCGTTTTCCCGTGGGGCTATGCGGTGAAGCTGACAAATTGGAGTTACTTTATTTCTTCCGTGAAGTTCACCGAATACACGGGAATTGAAGTTCCCTTGAATGAAGTTGCCTGA
PROTEIN sequence
Length: 138
MTFADKLKNLMKELDLTQSKLSDLTEIGKSSISQYLSGKNEPSKDRKQEIARALGVQDNYFEMFEPAATVQHDGVVNLPVPLAAKLMKKSKEWVMQGLRDGVFPWGYAVKLTNWSYFISSVKFTEYTGIEVPLNEVA*