ggKbase home page

L3_072_000M1_scaffold_153_9

Organism: dasL3_072_000M1_concoct_42_fa

near complete RP 45 / 55 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(6730..7371)

Top 3 Functional Annotations

Value Algorithm Source
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 213.0
  • Bit_score: 425
  • Evalue 2.80e-116
nth; endonuclease III (EC:4.2.99.18) similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 205.0
  • Bit_score: 216
  • Evalue 6.80e-54
Endonuclease III n=1 Tax=Clostridium sp. CAG:349 RepID=R6WQZ7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 213.0
  • Bit_score: 425
  • Evalue 2.00e-116

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:349 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 642
ATGACGGACAGAAACGCAAAACTTCTTGATACGCTGAAAAAGGATTATCCCGACGCAAAGTGCGAGTTAAATTTCGACACGCCGTTTCAACTGCTTGTCGCGGTCGTGCTGTCGGCGCAGTGTACGGATAAGCGCGTGAATATCGTCACGAGCGAACTGTTCAAGGTCGCAAAAACGCCGTCGGATTTCCAAAAAATGCCGCTCGAAACCTTGGAAAAACTCATATATTCCACGGGATTTTATCATAATAAGGCGGTCGCGATAAAGTCGCTTTCGGACGATATTGTCGAAAGGTTCGGCGGAAAAATGCCCGAAAACTTTGACGATCTCAAAAGCCTTCGCGGAGTCGGAAACAAAACGGCAAGCGTCGTTACCTGCGTCGCTTTGGGCGGCAACGCCTTGCCCGTCGATACCCACGTTTTCAGGCTCGCGCACAGGCTCGGGCTGTCGGACGGAAAAACTCCCGACGCCGTGATGAACGATCTGAAAGCGGAGTTTCCCGAAAAAAGCTGGTACGACTTGCATCACACGCTCATTTTTCACGGCAGATATACCTGCAAAAGTCAGCGTCCGTCGTGCGACAAATGCAACCTTCAAGAGTTTTGCAATTATTATAATGAAAACGTACGAAATAATAAGTAA
PROTEIN sequence
Length: 214
MTDRNAKLLDTLKKDYPDAKCELNFDTPFQLLVAVVLSAQCTDKRVNIVTSELFKVAKTPSDFQKMPLETLEKLIYSTGFYHNKAVAIKSLSDDIVERFGGKMPENFDDLKSLRGVGNKTASVVTCVALGGNALPVDTHVFRLAHRLGLSDGKTPDAVMNDLKAEFPEKSWYDLHHTLIFHGRYTCKSQRPSCDKCNLQEFCNYYNENVRNNK*